RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 FBXL3Q9UKT7 428 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 TBX21Q9UL17 535 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ARHGAP21Q5T5U3 1957 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ZNF646O15015 1829 aaPredicted RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 TNS2Q63HR2 1409 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 KIAA0232Q92628 1395 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 TOX3O15405 576 aaPredicted RBP4.29□□□□□ -1.72
SMC5-202ENST00000471372 FABP7O15540 132 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 SPAG7O75391 227 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 IGLV3-25P01717 112 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 ZNF688P0C7X2 276 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 TAC1P20366 129 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 M6PRP20645 277 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 MDKP21741 143 aaPredicted RBP4.29□□□□□ -1.72
SMC5-202ENST00000471372 PRSS3P35030 304 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 EMP2P54851 167 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 ADIGQ0VDE8 80 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 C16orf72Q14CZ0 275 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 FBXL19-AS1Q494R0 122 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 USP50Q70EL3 339 aaPredicted RBP4.29□□□□□ -1.72
SMC5-202ENST00000471372 PRNTQ86SH4 94 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 WDR86Q86TI4 376 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 ATP6V1C2Q8NEY4 427 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 TTLQ8NG68 377 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 OR2M7Q8NG81 312 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 OR5AK3PQ8NH89 298 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 HGDQ93099 445 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 SPACA5Q96QH8 159 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 ING2Q9H160 280 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 ZNF355PQ9NSJ1 428 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 CDC42BPBQ9Y5S2 1711 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 ADAMTS9Q9P2N4 1935 aa4.29□□□□□ -1.72
SMC5-202ENST00000471372 TMEM131Q92545 1883 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 RAD50Q92878 1312 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 GOLGA6L10A6NI86 522 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 COCHO43405 550 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 ZNF207O43670 478 aaKnown RBP4.28□□□□□ -1.72
SMC5-202ENST00000471372 MPZL1O95297 269 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 ZNF35P13682 527 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 TSPOP30536 169 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 GCLMP48507 274 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 TTPAP49638 278 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 ACOT2P49753 483 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 RPL10AP62906 217 aaKnown RBP4.28□□□□□ -1.72
SMC5-202ENST00000471372 BAXQ07812 192 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 CCDC122Q5T0U0 273 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 GUSBP11Q6P575 273 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 RNF10Q8N5U6 811 aaKnown RBP4.28□□□□□ -1.72
SMC5-202ENST00000471372 DYNC2LI1Q8TCX1 351 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 MRPL48Q96GC5 212 aaKnown RBP4.28□□□□□ -1.72
SMC5-202ENST00000471372 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 NARS2Q96I59 477 aaKnown RBP4.28□□□□□ -1.72
SMC5-202ENST00000471372 FAM210AQ96ND0 272 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 LHX5Q9H2C1 402 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 NKIRAS1Q9NYS0 192 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 RAB22AQ9UL26 194 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 TSPOAP1O95153 1857 aa4.28□□□□□ -1.72
SMC5-202ENST00000471372 IGHV7-4-1A0A0J9YVY3 117 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 OR2AT4A6NND4 320 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 UBDO15205 165 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 RAB36O95755 333 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 NIPAL1Q6NVV3 410 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 OR10G2Q8NGC3 310 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 DNAJB3Q8WWF6 145 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 PGLYRP3Q96LB9 341 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 TMEM56Q96MV1 263 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 BIRC8Q96P09 236 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 HBEGFQ99075 208 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 ZNF649Q9BS31 505 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 DCUN1D5Q9BTE7 237 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 MRPL20Q9BYC9 149 aaKnown RBP4.27□□□□□ -1.73
SMC5-202ENST00000471372 MFSD1Q9H3U5 465 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 METTL17Q9H7H0 456 aaPredicted RBP4.27□□□□□ -1.73
SMC5-202ENST00000471372 CA10Q9NS85 328 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 TMEM14AQ9Y6G1 99 aa4.27□□□□□ -1.73
SMC5-202ENST00000471372 NPHP4O75161 1426 aaPredicted RBP4.27□□□□□ -1.73
SMC5-202ENST00000471372 CROCCQ5TZA2 2017 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 GATBO75879 557 aaKnown RBP4.26□□□□□ -1.73
SMC5-202ENST00000471372 HLA-DQA1P01909 254 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 ME2P23368 584 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 RHOAP61586 193 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 PPP1CAP62136 330 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 TEX30Q5JUR7 227 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 C10orf107Q8IVU9 208 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 CYP4Z2PQ8N1L4 340 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 FAM45AQ8TCE6 357 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 CPNE4Q96A23 557 aaPredicted RBP4.26□□□□□ -1.73
SMC5-202ENST00000471372 NDFIP1Q9BT67 221 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 DRC3Q9H069 523 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 POMKQ9H5K3 350 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 DIABLOQ9NR28 239 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 SDHAF3Q9NRP4 125 aa4.26□□□□□ -1.73
SMC5-202ENST00000471372 RBM22Q9NW64 420 aaKnown RBP eCLIP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms