RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ALKBH6Q3KRA9 238 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM76BQ5HYJ3 339 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 NHLRC3Q5JS37 347 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 TRAPPC6BQ86SZ2 158 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 WDR86Q86TI4 376 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FJX1Q86VR8 437 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FBXL14Q8N1E6 418 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 TMEM229BQ8NBD8 167 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 NUP37Q8NFH4 326 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 UPRTQ96BW1 309 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 ARHGAP5-AS1Q96IT6 56 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 MARVELD1Q9BSK0 173 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 PECRQ9BY49 303 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 MMP28Q9H239 520 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 OR51I2Q9H344 312 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 ZMAT3Q9HA38 289 aaKnown RBP8.01□□□□□ -1.13
VPS52-216ENST00000471309 COQ3Q9NZJ6 369 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 NLKQ9UBE8 527 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 HSF4Q9ULV5 492 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 ANAPC10Q9UM13 185 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 KCNK7Q9Y2U2 307 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 MEIS3P1A6NDR6 274 aa8□□□□□ -1.13
VPS52-216ENST00000471309 PRSS44E7EML9 344 aa8□□□□□ -1.13
VPS52-216ENST00000471309 TRAPPC2LH3BP13 241 aa8□□□□□ -1.13
VPS52-216ENST00000471309 MLNRO43193 412 aa8□□□□□ -1.13
VPS52-216ENST00000471309 TPD52L2O43399 206 aaKnown RBP8□□□□□ -1.13
VPS52-216ENST00000471309 SYNGR1O43759 233 aa8□□□□□ -1.13
VPS52-216ENST00000471309 SSX5O60225 188 aa8□□□□□ -1.13
VPS52-216ENST00000471309 PFDN1O60925 122 aa8□□□□□ -1.13
VPS52-216ENST00000471309 CD74P04233 296 aa8□□□□□ -1.13
VPS52-216ENST00000471309 THBDP07204 575 aa8□□□□□ -1.13
VPS52-216ENST00000471309 AKAIN1P0CW23 69 aa8□□□□□ -1.13
VPS52-216ENST00000471309 TBPP20226 339 aa8□□□□□ -1.13
VPS52-216ENST00000471309 BCL3P20749 454 aa8□□□□□ -1.13
VPS52-216ENST00000471309 GABRR1P24046 479 aa8□□□□□ -1.13
VPS52-216ENST00000471309 PTAFRP25105 342 aa8□□□□□ -1.13
VPS52-216ENST00000471309 CBX5P45973 191 aa8□□□□□ -1.13
VPS52-216ENST00000471309 FABP6P51161 128 aa8□□□□□ -1.13
VPS52-216ENST00000471309 FGF12P61328 243 aa8□□□□□ -1.13
VPS52-216ENST00000471309 ADORA2A-AS1P86434 159 aa8□□□□□ -1.13
VPS52-216ENST00000471309 ALKBH2Q6NS38 261 aa8□□□□□ -1.13
VPS52-216ENST00000471309 HAGHLQ6PII5 290 aaPredicted RBP8□□□□□ -1.13
VPS52-216ENST00000471309 C22orf34Q6ZV56 151 aa8□□□□□ -1.13
VPS52-216ENST00000471309 LINC00596Q86U02 117 aa8□□□□□ -1.13
VPS52-216ENST00000471309 RTN4RL2Q86UN3 420 aa8□□□□□ -1.13
VPS52-216ENST00000471309 GLCCI1Q86VQ1 547 aa8□□□□□ -1.13
VPS52-216ENST00000471309 SPERTQ8NA61 448 aa8□□□□□ -1.13
VPS52-216ENST00000471309 OR4C16Q8NGL9 310 aa8□□□□□ -1.13
VPS52-216ENST00000471309 NUDCD2Q8WVJ2 157 aa8□□□□□ -1.13
VPS52-216ENST00000471309 RNASE6Q93091 150 aaKnown RBP8□□□□□ -1.13
VPS52-216ENST00000471309 SLAMF9Q96A28 289 aa8□□□□□ -1.13
VPS52-216ENST00000471309 PLK3Q9H4B4 646 aa8□□□□□ -1.13
VPS52-216ENST00000471309 NGBQ9NPG2 151 aa8□□□□□ -1.13
VPS52-216ENST00000471309 IFT46Q9NQC8 304 aa8□□□□□ -1.13
VPS52-216ENST00000471309 TMEM100Q9NV29 134 aa8□□□□□ -1.13
VPS52-216ENST00000471309 NKIRAS2Q9NYR9 191 aa8□□□□□ -1.13
VPS52-216ENST00000471309 MTCH1Q9NZJ7 389 aa8□□□□□ -1.13
VPS52-216ENST00000471309 ELF5Q9UKW6 265 aaPredicted RBP8□□□□□ -1.13
VPS52-216ENST00000471309 ST3GAL6Q9Y274 331 aa8□□□□□ -1.13
VPS52-216ENST00000471309 POLDIP2Q9Y2S7 368 aa8□□□□□ -1.13
VPS52-216ENST00000471309 NUBP2Q9Y5Y2 271 aa8□□□□□ -1.13
VPS52-216ENST00000471309 DMXL2Q8TDJ6 3036 aa8□□□□□ -1.13
VPS52-216ENST00000471309 SVILO95425 2214 aa8□□□□□ -1.13
VPS52-216ENST00000471309 ZZEF1O43149 2961 aa8□□□□□ -1.13
VPS52-216ENST00000471309 LAMA5O15230 3695 aa8□□□□□ -1.13
VPS52-216ENST00000471309 BSNQ9UPA5 3926 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 IGLV3-9A0A075B6K5 115 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 A0A0B4J293 547 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 H3BUI4 141 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 GEMIN2O14893 280 aaKnown RBP7.99□□□□□ -1.13
VPS52-216ENST00000471309 IGHV3-13P01766 116 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CD3DP04234 171 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 TCRBP04435 133 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 NAT1P18440 290 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 GIFP27352 417 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CHATP28329 748 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 PMELP40967 661 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 NPBWR2P48146 333 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CCR6P51684 374 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 RAG2P55895 527 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 KLF3P57682 345 aaPredicted RBP7.99□□□□□ -1.13
VPS52-216ENST00000471309 BTG1P62324 171 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 SORDQ00796 357 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 MZT1Q08AG7 82 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 ZNF154Q13106 437 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 MEF2DQ14814 521 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 DAZAP2Q15038 168 aaPredicted RBP7.99□□□□□ -1.13
VPS52-216ENST00000471309 TAF9Q16594 264 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 MPV17LQ2QL34 196 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 PIGYQ3MUY2 71 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 RSBN1Q5VWQ0 802 aaPredicted RBP7.99□□□□□ -1.13
VPS52-216ENST00000471309 SIGIRRQ6IA17 410 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 STEAP1BQ6NZ63 245 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 Q6ZR03 302 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 BTN2A1Q7KYR7 527 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 C6orf201Q7Z4U5 140 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 WFDC8Q8IUA0 241 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 Q8IYB0 196 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CADM3Q8N126 398 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms