RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ASRGL1Q7L266 308 aa13.29□□□□□ -0.28
COL9A3-208ENST00000469802 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
COL9A3-208ENST00000469802 C17orf50Q8WW18 174 aa13.29□□□□□ -0.28
COL9A3-208ENST00000469802 RORBQ92753 470 aa13.29□□□□□ -0.28
COL9A3-208ENST00000469802 CHST5Q9GZS9 411 aa13.29□□□□□ -0.28
COL9A3-208ENST00000469802 METTL15A6NJ78 407 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 H0YAE9 185 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 RPP14O95059 124 aaKnown RBP13.28□□□□□ -0.28
COL9A3-208ENST00000469802 NXPH2O95156 264 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 APOL3O95236 402 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 CAPZA1P52907 286 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 TMEM200BQ69YZ2 307 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 MKXQ8IYA7 352 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
COL9A3-208ENST00000469802 EME1Q96AY2 570 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 FAM234AQ9H0X4 552 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 RIBC2Q9H4K1 309 aa13.28□□□□□ -0.28
COL9A3-208ENST00000469802 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL9A3-208ENST00000469802 SF3B6Q9Y3B4 125 aaKnown RBP13.28□□□□□ -0.28
COL9A3-208ENST00000469802 NOTCH1P46531 2555 aa13.27□□□□□ -0.28
COL9A3-208ENST00000469802 TET2Q6N021 2002 aaPredicted RBP13.27□□□□□ -0.28
COL9A3-208ENST00000469802 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 ANGPTL7O43827 346 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 TK1P04183 234 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 TGFBR2P37173 567 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 ZNF85Q03923 595 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 ZNF273Q14593 569 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 UBE2V2Q15819 145 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 AANATQ16613 207 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 ASPHD2Q6ICH7 369 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 ANGPTL5Q86XS5 388 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 PRSS35Q8N3Z0 413 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 CCDC54Q8NEL0 328 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 OR10H4Q8NGA5 316 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 RBM4BQ9BQ04 359 aaKnown RBP13.27□□□□□ -0.29
COL9A3-208ENST00000469802 PLEKHA1Q9HB21 404 aa13.27□□□□□ -0.29
COL9A3-208ENST00000469802 LOC107986453A0A1B0GWG9 222 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 A0A1W2PPH5 198 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 SAC3D1A6NKF1 404 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 E9PQ18 207 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 F8VVB4 439 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 F8VWA3 439 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 H3BUX3 64 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 K7N7A8 449 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 M0QZ24 198 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 TIMM23O14925 209 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 SYT7O43581 403 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 ZNF737O75373 536 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 KIR3DL2P43630 455 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 DLX6P56179 175 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 ODF4Q2M2E3 257 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 CRIP3Q6Q6R5 217 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 BATF2Q8N1L9 274 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 TRMT10AQ8TBZ6 339 aaKnown RBP13.26□□□□□ -0.29
COL9A3-208ENST00000469802 RFKQ969G6 155 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 C10orf35Q96D05 121 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 MEGF9Q9H1U4 602 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 USE1Q9NZ43 259 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 MTCH1Q9NZJ7 389 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 OR14J1Q9UGF5 321 aa13.26□□□□□ -0.29
COL9A3-208ENST00000469802 MEGF11A6BM72 1044 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 J3QRE1 110 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 GATBO75879 557 aaKnown RBP13.25□□□□□ -0.29
COL9A3-208ENST00000469802 ALPLP05186 524 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 UBCP0CG48 685 aaKnown RBP13.25□□□□□ -0.29
COL9A3-208ENST00000469802 CCL3L1P16619 93 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 CDC42P60953 191 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 LRRC75BQ2VPJ9 315 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 OR4M1Q8NGD0 313 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 CEP19Q96LK0 163 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 SSX3Q99909 188 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 MMP27Q9H306 513 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 SLC7A11Q9UPY5 501 aa13.25□□□□□ -0.29
COL9A3-208ENST00000469802 FAM230AA0A1W2PPH8 454 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 C17orf98A8MV24 154 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 H3BSH0 61 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 CIB2O75838 187 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 BMXP51813 675 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 FUT6P51993 359 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 TP53I3Q53FA7 332 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 SLC25A30Q5SVS4 291 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 TCF23Q7RTU1 214 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 FAM220AQ7Z4H9 259 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
COL9A3-208ENST00000469802 PYDC1Q8WXC3 89 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 PPA2Q9H2U2 334 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 HEXA-AS1Q9H8Q6 139 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
COL9A3-208ENST00000469802 FBLN5Q9UBX5 448 aa13.24□□□□□ -0.29
COL9A3-208ENST00000469802 hCG_1809904A0A1W2PP81 198 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 A0A1W2PPE2 198 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 A0A1W2PR64 198 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 A0A1W2PRV1 198 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 FAM90A8PA6NJQ4 464 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 H3BNX3 289 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 RBP4P02753 201 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 ATP6V1E1P36543 226 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 ERVFRD-1P60508 538 aa13.23□□□□□ -0.29
COL9A3-208ENST00000469802 COL10A1Q03692 680 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms