RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FAAP20Q6NZ36 180 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 SEZ6L2Q6UXD5 910 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 BATF2Q8N1L9 274 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 TMEM229BQ8NBD8 167 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 CREB3L1Q96BA8 519 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 MARVELD1Q9BSK0 173 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 OR51I2Q9H344 312 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 PLEKHJ1Q9NW61 149 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 NKIRAS2Q9NYR9 191 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 NUBP2Q9Y5Y2 271 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.19■□□□□ 0.18
SMC4-209ENST00000468653 AKR7A2O43488 359 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 CD3DP04234 171 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 CHRNB4P30926 498 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 ASCL1P50553 236 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 CARTPTQ16568 116 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 STEAP1BQ6NZ63 245 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 TMEM108Q6UXF1 575 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 OR4C16Q8NGL9 310 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMC4-209ENST00000468653 COQ3Q9NZJ6 369 aa16.19■□□□□ 0.18
SMC4-209ENST00000468653 ZNF107Q9UII5 783 aaPredicted RBP16.19■□□□□ 0.18
SMC4-209ENST00000468653 LRP5LA4QPB2 252 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 SERPINE3A8MV23 424 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 ZNF736B4DX44 427 aaPredicted RBP16.18■□□□□ 0.18
SMC4-209ENST00000468653 ATP6V1G2-DDX39BF2Z307 99 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 INMT-MINDY4F8WBC2 141 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 GEMIN2O14893 280 aaKnown RBP16.18■□□□□ 0.18
SMC4-209ENST00000468653 SYNGR1O43759 233 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 SSX5O60225 188 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 PPP3CBP16298 524 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 GLRXP35754 106 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 RBM11P57052 281 aaKnown RBP16.18■□□□□ 0.18
SMC4-209ENST00000468653 IL24Q13007 206 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 IGFBP7Q16270 282 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 PKIBQ9C010 78 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 NUDT15Q9NV35 164 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 MTCH1Q9NZJ7 389 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 H0YL77 283 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 J3QT63 122 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 PTAFRP25105 342 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 HLA-DMAP28067 261 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 RAB25P57735 213 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 RPS23P62266 143 aaKnown RBP16.18■□□□□ 0.18
SMC4-209ENST00000468653 NKX6-1P78426 367 aaPredicted RBP16.18■□□□□ 0.18
SMC4-209ENST00000468653 ELP2Q6IA86 826 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 VHLLQ6RSH7 139 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 ZNF782Q6ZMW2 699 aaPredicted RBP16.18■□□□□ 0.18
SMC4-209ENST00000468653 C6orf201Q7Z4U5 140 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 GVQW1Q8N7I0 195 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 Q8NFD4 153 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 ST8SIA4Q92187 359 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 DUSP13Q9UII6 198 aa16.18■□□□□ 0.18
SMC4-209ENST00000468653 TRAV6A0A075B6T7 132 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 FAM90A27PA6NNH2 459 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 RAB3DO95716 219 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 MPZP25189 248 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 FGF12P61328 243 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 SIGIRRQ6IA17 410 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 OR10AD1Q8NGE0 317 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 OR4D10Q8NGI6 311 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 POM121Q96HA1 1249 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 HSF4Q9ULV5 492 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 PKD1L2Q7Z442 2459 aa16.17■□□□□ 0.18
SMC4-209ENST00000468653 TMEM210A6NLX4 147 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 THBDP07204 575 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 GRPP07492 148 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 ZNF250P15622 560 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 CBX5P45973 191 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 SNU13P55769 128 aaKnown RBP16.16■□□□□ 0.18
SMC4-209ENST00000468653 TATDN3Q17R31 274 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 FAM76BQ5HYJ3 339 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 BTN2A1Q7KYR7 527 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 WDR86Q86TI4 376 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
SMC4-209ENST00000468653 OR4S1Q8NGB4 309 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 OR13G1Q8NGZ3 307 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 CYYR1Q96J86 154 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 CXXC4Q9H2H0 198 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 MSL2Q9HCI7 577 aa16.16■□□□□ 0.18
SMC4-209ENST00000468653 F8VVB4 439 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 F8VWA3 439 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 M0QYG6 137 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 MLNRO43193 412 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 CA11O75493 328 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 CHATP28329 748 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 KLF3P57682 345 aaPredicted RBP16.15■□□□□ 0.18
SMC4-209ENST00000468653 BTG1P62324 171 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 AGAP6Q5VW22 663 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 Q6ZR03 302 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 SPERTQ8NA61 448 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 SCCPDHQ8NBX0 429 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 OR56B4Q8NH76 319 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 WFIKKN1Q96NZ8 548 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 OCSTAMPQ9BR26 566 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 FAAP24Q9BTP7 215 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 NGBQ9NPG2 151 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 ZNF581Q9P0T4 197 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 POLDIP2Q9Y2S7 368 aa16.15■□□□□ 0.18
SMC4-209ENST00000468653 RHBDL1O75783 438 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms