RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ZNF775Q96BV0 537 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 UCN2Q96RP3 112 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 GPR173Q9NS66 373 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 PLEK2Q9NYT0 353 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 RCC2Q9P258 522 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 FBXO24O75426 580 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 IFNA4P05014 189 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 CCL4P13236 92 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 Q3ZCU0 254 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 RXFP4Q8TDU9 374 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 GNRHR2Q96P88 292 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 PAPOLGQ9BWT3 736 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
TSPAN4-211ENST00000468468 K7EPK0 472 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 AGPAT2O15120 278 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 ONECUT2O95948 504 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 CST4P01036 141 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 ECI1P42126 302 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 HIST1H3AP68431 136 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 CHAF1BQ13112 559 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 SMCO1Q147U7 214 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 HIST2H3PS2Q5TEC6 136 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 RAET1LQ5VY80 246 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 MRPL14Q6P1L8 145 aaKnown RBP13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 HIST2H3AQ71DI3 136 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 FAM71E2Q8N5Q1 922 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 TECTAO75443 2155 aa13.77□□□□□ -0.2
TSPAN4-211ENST00000468468 RRP8O43159 456 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 KLK3P07288 261 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 CD63P08962 238 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 SMIM6P0DI80 62 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 NFYBP25208 207 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 FCGR2CP31995 323 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 OTX1P32242 354 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 SULT1A2P50226 295 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 MTCP1P56278 107 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 SNAI3Q3KNW1 292 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 RPUSD3Q6P087 351 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 FOXL2NBQ6ZUU3 175 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 SGK3Q96BR1 496 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 Q96M66 194 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 ZFP57Q9NU63 452 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 LSM5Q9Y4Y9 91 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 EML6Q6ZMW3 1958 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 A0A087WZY1 265 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 IFNA21P01568 189 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 IGHV2-70P01814 119 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 S100A9P06702 114 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF133P52736 654 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 PCOLCEQ15113 449 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 C9orf152Q5JTZ5 239 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 GGNBP1Q5YKI7 109 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 TMEM123Q8N131 208 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 OR9K2Q8NGE7 335 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 SPTSSAQ969W0 71 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 FAAP24Q9BTP7 215 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 SMIM3Q9BZL3 60 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 FBXL17Q9UF56 701 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 ANXA10Q9UJ72 324 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 PADI1Q9ULC6 663 aa13.77□□□□□ -0.21
TSPAN4-211ENST00000468468 MEX3AA1L020 520 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 G3V3Y1 287 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 GATCO43716 136 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 ANGPTL7O43827 346 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 DEDDO75618 318 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 SFTA3P0C7M3 94 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 FGF5P12034 268 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 TMEM268Q5VZI3 342 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 Q6ZSR3 168 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 C10orf35Q96D05 121 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF837Q96EG3 531 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 JSRP1Q96MG2 331 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 NAA11Q9BSU3 229 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 ULBP2Q9BZM5 246 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 MSTNO14793 375 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 SCGB1D2O95969 90 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 OR5H8P0DN80 308 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 RRADP55042 308 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 PDZK1IP1Q13113 114 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF124Q15973 351 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 BTNL8Q6UX41 500 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 OR2AE1Q8NHA4 323 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 PRRX2Q99811 253 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 TUBD1Q9UJT1 453 aa13.76□□□□□ -0.21
TSPAN4-211ENST00000468468 MYO7BQ6PIF6 2116 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 FAM230AA0A1W2PPH8 454 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 SPRY1O43609 319 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 VAMP5O95183 116 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 CCL3P10147 92 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 ID4P47928 161 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 RSU1Q15404 277 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 TAF9Q16594 264 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 ACER2Q5QJU3 275 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms