RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 NOS1APO75052 506 aaPredicted RBP9.49□□□□□ -0.89
CDHR3-205ENST00000468143 WBP4O75554 376 aaKnown RBP9.49□□□□□ -0.89
CDHR3-205ENST00000468143 GATBO75879 557 aaKnown RBP9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CALCBP10092 127 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF20P17024 532 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 MPZP25189 248 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CFPP27918 469 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CAV3P56539 151 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 BPIFB3P59826 476 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ACTA2P62736 377 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ACTG2P63267 376 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 RAB40BQ12829 278 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 IL24Q13007 206 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 KLRD1Q13241 179 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ALKBH1Q13686 389 aaKnown RBP9.49□□□□□ -0.89
CDHR3-205ENST00000468143 SMIM21Q3B7S5 101 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 FDX2Q6P4F2 183 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 SLC25A26Q70HW3 274 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CMTM4Q8IZR5 234 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 FAM185AQ8N0U4 392 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 PNKDQ8N490 385 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF676Q8N7Q3 588 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CCDC54Q8NEL0 328 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 OR4M1Q8NGD0 313 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 C8orf46Q8TAG6 207 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CNIH3Q8TBE1 160 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CYGBQ8WWM9 190 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 SLC25A28Q96A46 364 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF649Q9BS31 505 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 PKIBQ9C010 78 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 CHST5Q9GZS9 411 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 C19orf12Q9NSK7 152 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 ERVK13-1Q9NX77 482 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 MTCH1Q9NZJ7 389 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 WNK2Q9Y3S1 2297 aa9.49□□□□□ -0.89
CDHR3-205ENST00000468143 OR4C45A6NMZ5 311 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 RNASEK-C17orf49H0YIS7 233 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 IGHA1P01876 353 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 ISG15P05161 165 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
CDHR3-205ENST00000468143 ATF1P18846 271 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 PEX2P28328 305 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 POU3F4P49335 361 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 CCR9P51686 369 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 GTF2A1P52655 376 aaPredicted RBP9.48□□□□□ -0.89
CDHR3-205ENST00000468143 ATP1B3P54709 279 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 MTCP1P56278 107 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 ERVFRD-1P60508 538 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 CNN3Q15417 329 aaKnown RBP9.48□□□□□ -0.89
CDHR3-205ENST00000468143 KLHL22Q53GT1 634 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 Q6YL49 198 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 RNF144BQ7Z419 303 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 EGFL6Q8IUX8 553 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF561Q8N587 486 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 C3orf56Q8N813 242 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 OR13C3Q8NGS6 347 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 PP6455Q8WZ26 134 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 RFT1Q96AA3 541 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 MRPL48Q96GC5 212 aaKnown RBP9.48□□□□□ -0.89
CDHR3-205ENST00000468143 CEP19Q96LK0 163 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 PRDM13Q9H4Q3 707 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 HES4Q9HCC6 221 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 MRPS18AQ9NVS2 196 aaKnown RBP9.48□□□□□ -0.89
CDHR3-205ENST00000468143 HHLA2Q9UM44 414 aa9.48□□□□□ -0.89
CDHR3-205ENST00000468143 MEX3AA1L020 520 aaKnown RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 H0YAE9 185 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 SLC1A7O00341 560 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 SPRY1O43609 319 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 KNG1P01042 644 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 MELTFP08582 738 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 OCM2P0CE71 109 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 OCMP0CE72 109 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 HKR1P10072 659 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 OMGP23515 440 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 AZGP1P25311 298 aaKnown RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 NPBWR2P48146 333 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 COMPP49747 757 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 RBP2P50120 134 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 GBX2P52951 348 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 SNU13P55769 128 aaKnown RBP9.47□□□□□ -0.89
CDHR3-205ENST00000468143 COL10A1Q03692 680 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 AWAT1Q58HT5 328 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 ZNF691Q5VV52 312 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 TMEM200BQ69YZ2 307 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 C16orf87Q6PH81 154 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 SYS1Q8N2H4 156 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 KIR3DL3Q8N743 410 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 OR13C9Q8NGT0 318 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 C10orf35Q96D05 121 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 RDH12Q96NR8 316 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 SPACA5Q96QH8 159 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 NOX4Q9NPH5 578 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 INPP5EQ9NRR6 644 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 IL36RNQ9UBH0 155 aa9.47□□□□□ -0.89
CDHR3-205ENST00000468143 CLDN34H7C241 214 aa9.46□□□□□ -0.9
CDHR3-205ENST00000468143 ANGPTL7O43827 346 aa9.46□□□□□ -0.9
CDHR3-205ENST00000468143 ZFPL1O95159 310 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms