RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 HLA-GP17693 338 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TAC1P20366 129 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 UGT2B10P36537 528 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 CD151P48509 253 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 XKP51811 444 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 AQP5P55064 265 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TRAM1Q15629 374 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 C5orf47Q569G3 176 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF470Q6ECI4 717 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 CYP4Z2PQ8N1L4 340 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 OTUD6BQ8N6M0 293 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TMEM105Q8N8V8 129 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TNFRSF14Q92956 283 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 FXYD5Q96DB9 178 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 ZMYND19Q96E35 227 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-209ENST00000467124 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 WDR34Q96EX3 536 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 FMC1Q96HJ9 113 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 SERPINB11Q96P15 392 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 OR2M4Q96R27 311 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TBL1XR1Q9BZK7 514 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TAS2R13Q9NYV9 303 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 RWDD2AQ9UIY3 292 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 KLF13Q9Y2Y9 288 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF706Q9Y5V0 76 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-209ENST00000467124 ELP1O95163 1332 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 IGHV1-3A0A0C4DH29 117 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 TMEM150BA6NC51 233 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 CENPBD1B2RD01 187 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 H3BP45 60 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 LGALS9O00182 355 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 SULT1C2O00338 296 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 CNMDO75829 334 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 SCO1O75880 301 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 CD74P04233 296 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 KCNJ3P48549 501 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 DSTNP60981 165 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 PRKCDQ05655 676 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF816Q0VGE8 651 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-209ENST00000467124 PMS2P3Q13401 168 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 TRIP13Q15645 432 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-209ENST00000467124 IDNKQ5T6J7 187 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 HBMQ6B0K9 141 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 Q6ZT83 130 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 BOD1L2Q8IYS8 172 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 ORMDL3Q8N138 153 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 OSR2Q8N2R0 312 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 OR5M1Q8NGP8 315 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 SMARCD1Q96GM5 515 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 ACBD6Q9BR61 282 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 CHCHD7Q9BUK0 85 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 NDEL1Q9GZM8 345 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 POMKQ9H5K3 350 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 PRORYQ9H606 182 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 ASB7Q9H672 318 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 CYTL1Q9NRR1 136 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 NLE1Q9NVX2 485 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-209ENST00000467124 MAT2BQ9NZL9 334 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 RBM12B-AS1Q9P1G2 102 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 PRO0461Q9UI25 63 aa2.43□□□□□ -2.02
VPS13A-209ENST00000467124 SETD1AO15047 1707 aaKnown RBP2.42□□□□□ -2.02
VPS13A-209ENST00000467124 ADAMTSL3P82987 1691 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 IGLV4-60A0A075B6I1 120 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 LOC389332A0A1B0GUA5 103 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 TMEM72A0PK05 275 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 IQCF5A8MTL0 148 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 F8VP50 259 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 BET1O15155 118 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 SGCEO43556 437 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 OR2A4O95047 310 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 MAS1P04201 325 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF616Q08AN1 781 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 EIF4EBP2Q13542 120 aaPredicted RBP2.42□□□□□ -2.02
VPS13A-209ENST00000467124 TMEM241Q24JQ0 296 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 CEACAM16Q2WEN9 425 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 FBXL19-AS1Q494R0 122 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 OR10J3Q5JRS4 329 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF773Q6PK81 442 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 UGT2A3Q6UWM9 527 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 LRRC6Q86X45 466 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 FAM57AQ8TBR7 257 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 GTF2H4Q92759 462 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 MRPL48Q96GC5 212 aaKnown RBP2.42□□□□□ -2.02
VPS13A-209ENST00000467124 RNF157Q96PX1 679 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 OR2A7Q96R45 310 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 MS4A8Q9BY19 250 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 UPF3BQ9BZI7 483 aaKnown RBP2.42□□□□□ -2.02
VPS13A-209ENST00000467124 FBXL15Q9H469 300 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 ZSCAN16Q9H4T2 348 aaPredicted RBP2.42□□□□□ -2.02
VPS13A-209ENST00000467124 DHX35Q9H5Z1 703 aaKnown RBP2.42□□□□□ -2.02
VPS13A-209ENST00000467124 ABCB9Q9NP78 766 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 SDHAF3Q9NRP4 125 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 DNAJC27Q9NZQ0 273 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 SNX24Q9Y343 169 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 INSIG2Q9Y5U4 225 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 PTPRTO14522 1441 aa2.42□□□□□ -2.02
VPS13A-209ENST00000467124 PLA2R1Q13018 1463 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 PIK3R4Q99570 1358 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 KIR2DS1A0A191URI9 304 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 A0A1W2PNU3 283 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms