RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RBMXP38159 391 aaKnown RBP13.4□□□□□ -0.26
GPC1-207ENST00000466624 PTGFRP43088 359 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 RPL5P46777 297 aaKnown RBP13.4□□□□□ -0.26
GPC1-207ENST00000466624 PSMD7P51665 324 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 MICBQ29980 383 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 SMIM21Q3B7S5 101 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 FAM201AQ5SY85 155 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 ACP7Q6ZNF0 438 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 SATL1Q86VE3 508 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 OR5D18Q8NGL1 313 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 OR51F2Q8NH61 342 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 TNFAIP8L1Q8WVP5 186 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 SLAMF9Q96A28 289 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 CHCHD6Q9BRQ6 235 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 DNTTIP1Q9H147 329 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 SMURF1Q9HCE7 757 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 MAP1AP78559 2803 aaPredicted RBP13.4□□□□□ -0.27
GPC1-207ENST00000466624 IGHV4-61A0A0C4DH41 118 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 IGKV1-12A0A0C4DH73 117 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 RNF223E7ERA6 249 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 C3orf80F5H4A9 247 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 PDCD5O14737 125 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 IGKV1D-12P01611 117 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 TMEM225BP0DP42 221 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 MTNR1BP49286 362 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 BMXP51813 675 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 C1orf100Q5SVJ3 147 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 DCDC5Q6ZRR9 648 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 TPRA1Q86W33 373 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 JAGN1Q8N5M9 183 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 BOLLQ8N9W6 283 aaKnown RBP13.39□□□□□ -0.27
GPC1-207ENST00000466624 Q8NFD4 153 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 CLDND2Q8NHS1 167 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 KCTD7Q96MP8 289 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 GAL3ST1Q99999 423 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 TMEM246Q9BRR3 403 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 FUNDC2Q9BWH2 189 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 WDR13Q9H1Z4 485 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 IL36GQ9NZH8 169 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 NLKQ9UBE8 527 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
GPC1-207ENST00000466624 TNFRSF13BO14836 293 aaPredicted RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 WNT9BO14905 357 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 ANGPTL7O43827 346 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 AIREO43918 545 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 ZNF780AO75290 641 aaPredicted RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 NXPH2O95156 264 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 ZNF205O95201 554 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 HEXAP06865 529 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 RANBP1P43487 201 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 OR3A4PP47883 348 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 HOXA4Q00056 320 aaPredicted RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 ATPAF1Q5TC12 328 aaPredicted RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 STUMQ69YW2 141 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 SFRP4Q6FHJ7 346 aaPredicted RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 ELP2Q6IA86 826 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 GPR141Q7Z602 305 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 RAB39BQ96DA2 213 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 COX4I2Q96KJ9 171 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 S100A13Q99584 98 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 GFI1Q99684 422 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 CNTD2Q9H8S5 307 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 SEBOXQ9HB31 216 aaPredicted RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 PATZ1Q9HBE1 687 aaKnown RBP13.38□□□□□ -0.27
GPC1-207ENST00000466624 KAAG1Q9UBP8 84 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 GHRLQ9UBU3 117 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 MIOXQ9UGB7 285 aa13.38□□□□□ -0.27
GPC1-207ENST00000466624 FLNAP21333 2647 aaKnown RBP13.37□□□□□ -0.27
GPC1-207ENST00000466624 DOCK11Q5JSL3 2073 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 OR2AT4A6NND4 320 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 CEACAM18A8MTB9 384 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 F5H0A9 414 aaPredicted RBP13.37□□□□□ -0.27
GPC1-207ENST00000466624 KNG1P01042 644 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 IGHV2-5P01817 119 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 BCL3P20749 454 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 CFPP27918 469 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 NPBWR2P48146 333 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 LMO4P61968 165 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 GPR176Q14439 515 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 FIP1L1Q6UN15 594 aaKnown RBP13.37□□□□□ -0.27
GPC1-207ENST00000466624 C1QL2Q7Z5L3 287 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 ANKRD13BQ86YJ7 626 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 C19orf18Q8NEA5 215 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 DEFB108BQ8NET1 73 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 OR6M1Q8NGM8 313 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 ANGPTL6Q8NI99 470 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 TBC1D15Q8TC07 691 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 EMG1Q92979 244 aaKnown RBP13.37□□□□□ -0.27
GPC1-207ENST00000466624 C1orf159Q96HA4 380 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 CENPOQ9BU64 300 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 METTL9Q9H1A3 318 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 ZNF665Q9H7R5 613 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 HMG20AQ9NP66 347 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 PCDHB16Q9NRJ7 776 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms