RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TNFSF4P23510 183 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 HTR1FP30939 366 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PSMB10P40306 273 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 MDH2P40926 338 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 KIR3DL2P43630 455 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC15A1P46059 708 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 SRP9P49458 86 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ALDH3A2P51648 485 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 BLVRAP53004 296 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ISL1P61371 349 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF85Q03923 595 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF91Q05481 1191 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF154Q13106 437 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PRDX4Q13162 271 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TIGD6Q17RP2 521 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 LRRC36Q1X8D7 754 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ODF4Q2M2E3 257 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF181Q2M3W8 571 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 KRTAP24-1Q3LI83 254 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF404Q494X3 552 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 C4orf46Q504U0 113 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TP53I3Q53FA7 332 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 KLF17Q5JT82 389 aaPredicted RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 LPCAT4Q643R3 524 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZFP1Q6P2D0 407 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM65Q6PI78 240 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF322Q6U7Q0 402 aaPredicted RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 WDR82Q6UXN9 313 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RNF144BQ7Z419 303 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 KRT77Q7Z794 578 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PHC2Q8IXK0 858 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ENTHD1Q8IYW4 607 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF679Q8IYX0 411 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 BATF2Q8N1L9 274 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PRSS35Q8N3Z0 413 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 OR51F2Q8NH61 342 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 FAM81AQ8TBF8 368 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 APH1BQ8WW43 257 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 C22orf15Q8WYQ4 148 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RORBQ92753 470 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RPL3LQ92901 407 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TIMD4Q96H15 378 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PGAM5Q96HS1 289 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 OR8B4Q96RC9 309 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 CNN2Q99439 309 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RBM4BQ9BQ04 359 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF649Q9BS31 505 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PBOV1Q9GZY1 135 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 WDR13Q9H1Z4 485 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 NIPAL2Q9H841 368 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 AMBNQ9NP70 447 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 GPR84Q9NQS5 396 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 C1orf123Q9NWV4 160 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 CLN6Q9NWW5 311 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 HAO2Q9NYQ3 351 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 MRPL15Q9P015 296 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 NUFIP1Q9UHK0 495 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 PPIAL4EA0A075B759 164 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A0U1RQV5 110 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 A8MXK9 166 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PPIAL4DF5H284 164 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 CDIPTO14735 213 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 AKR7A2O43488 359 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 WBP4O75554 376 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 VENTXO95231 258 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 GYPAP02724 150 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PPIAL4FP0DN26 164 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF12P17014 697 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PEX2P28328 305 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 DCTDP32321 178 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 GPM6AP51674 278 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 DLX1P56177 255 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR12D2P58182 307 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 TIRAPP58753 221 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 CDC42P60953 191 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 GMFBP60983 142 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 SNRPGP62308 76 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PRB3Q04118 309 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 TWIST1Q15672 202 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 TMEM155Q4W5P6 130 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 LIPNQ5VXI9 398 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 LAIR2Q6ISS4 152 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 DCDC5Q6ZRR9 648 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 KRT74Q7RTS7 529 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 CATSPERDQ86XM0 798 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 KLBQ86Z14 1044 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 GID4Q8IVV7 300 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 ELMOD2Q8IZ81 293 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 RDH10Q8IZV5 341 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 SCCPDHQ8NBX0 429 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR1M1Q8NGA1 313 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR10H4Q8NGA5 316 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR5T2Q8NGG2 359 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR52H1Q8NGJ2 320 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR8J1Q8NGP2 316 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR10AC1Q8NH08 325 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 RHOXF1Q8NHV9 184 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms