RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	SPANXN4	Q5MJ08	99 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	AVPI1	Q5T686	147 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PRAMEF5	Q5TYX0	476 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	LYPLAL1	Q5VWZ2	237 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PRAMEF6	Q5VXH4	476 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RNLS	Q5VYX0	342 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	LPCAT4	Q643R3	524 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	LEMD1	Q68G75	181 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	KDM4D	Q6B0I6	523 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	OR8G2P	Q6IF36	304 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	DOK6	Q6PKX4	331 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	BAIAP2L2	Q6UXY1	529 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	LYG2	Q86SG7	212 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SLC22A15	Q8IZD6	547 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SFRP1	Q8N474	314 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	GPR26	Q8NDV2	337 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	C10orf82	Q8WW14	230 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SLC7A6	Q92536	515 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RGP1	Q92546	391 aa	Predicted RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	BPIFA2	Q96DR5	249 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SMIM10	Q96HG1	83 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PANX3	Q96QZ0	392 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	OR2V2	Q96R30	315 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	KCNA7	Q96RP8	456 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RASL10B	Q96S79	203 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ATOH8	Q96SQ7	321 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RNF2	Q99496	336 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PHB2	Q99623	299 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	VGLL1	Q99990	258 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	MRPL57	Q9BQC6	102 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	C7orf50	Q9BRJ6	194 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	OVOL2	Q9BRP0	275 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	UTP23	Q9BRU9	249 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	TMEM208	Q9BTX3	173 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	NDUFAF3	Q9BU61	184 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	MCRIP2	Q9BUT9	160 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ZNF426	Q9BUY5	554 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	NUDT9	Q9BW91	350 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	BEX2	Q9BXY8	128 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ANKRD60	Q9BZ19	345 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	WWTR1	Q9GZV5	400 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	NMRAL1	Q9HBL8	299 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SLCO1B3	Q9NPD5	702 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PRSS16	Q9NQE7	514 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SPANXA1	Q9NS26	97 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	C1orf109	Q9NX04	203 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RDH8	Q9NYR8	311 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PDP1	Q9P0J1	537 aa	Predicted RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	UBQLN2	Q9UHD9	624 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PLA2G4C	Q9UP65	541 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	BTRC	Q9Y297	605 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SLC6A5	Q9Y345	797 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	STRAP	Q9Y3F4	350 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	MMP24	Q9Y5R2	645 aa		4.07	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ROS1	P08922	2347 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	FREM1	Q5H8C1	2179 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	MUC4	Q99102	2169 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	HEATR5B	Q9P2D3	2071 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278		A0A087X0K7	114 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	NPIPA5	A0A0B4J1W7	369 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	TRBV2	A0A0J9YWF9	115 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278		A0A1W2PQL4	384 aa	Predicted RBP	4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	OR51F1	A6NGY5	319 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	NPIPA5	E9PKD4	350 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SGK494	L7N484	410 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	AIP	O00170	330 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	BTN3A3	O00478	584 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RAMP3	O60896	148 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	VPS26A	O75436	327 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SCGB2A1	O75556	95 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	OR4F21	O95013	312 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	KCNK2	O95069	426 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SOD1	P00441	154 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RPN2	P04844	631 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SERPINE1	P05121	402 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ALPI	P09923	528 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PIRT	P0C851	137 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	C1GALT1C1L	P0DN25	315 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	GABRA1	P14867	456 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ATP6V1B2	P21281	511 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	UQCRC2	P22695	453 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	SHMT2	P34897	504 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	DRD3	P35462	400 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	GGT2	P36268	569 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	NSG1	P42857	185 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RAB9A	P51151	201 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	FGF8	P55075	233 aa	Predicted RBP	4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	CDKN2D	P55273	166 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	TMEM50B	P56557	158 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	KCNK10	P57789	538 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	RAB11A	P62491	216 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	PITPNA	Q00169	270 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	BST1	Q10588	318 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	GPR50	Q13585	617 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	CEACAM7	Q14002	265 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	FASTK	Q14296	549 aa	Known RBP	4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	QPRT	Q15274	297 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	TRAM1	Q15629	374 aa		4.06	□□□□□ -1.76
CACNA1C-223	ENST00000465278	ATP6AP1	Q15904	470 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms