RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HOXD3P31249 432 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-220ENST00000464800 HAAOP46952 286 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 MNAT1P51948 309 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 FAM98BQ52LJ0 330 aaKnown RBP11.71□□□□□ -0.53
MCF2L-220ENST00000464800 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 TRPM8Q7Z2W7 1104 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 KRT77Q7Z794 578 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 PIGWQ7Z7B1 504 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 DHFR2Q86XF0 187 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 ASCC1Q8N9N2 400 aaKnown RBP11.71□□□□□ -0.53
MCF2L-220ENST00000464800 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 MYDGFQ969H8 173 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 TAS2R1Q9NYW7 299 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 ENPP5Q9UJA9 477 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 PIGLQ9Y2B2 252 aa11.71□□□□□ -0.53
MCF2L-220ENST00000464800 MEX3AA1L020 520 aaKnown RBP11.7□□□□□ -0.54
MCF2L-220ENST00000464800 ACOD1A6NK06 481 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 B2RBV5 119 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 PRR23D1E9PI22 279 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-220ENST00000464800 K7N7A8 449 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 NOS1APO75052 506 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-220ENST00000464800 NRASP01111 189 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 PRR23D2P0DMB1 279 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-220ENST00000464800 EDDM3BP56851 147 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 MS4A2Q01362 244 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
MCF2L-220ENST00000464800 TRIM25Q14258 630 aaKnown RBP11.7□□□□□ -0.54
MCF2L-220ENST00000464800 MINOS1Q5TGZ0 78 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 PLBD1Q6P4A8 553 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 C16orf82Q7Z2V1 217 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 NDNFQ8TB73 568 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 OR51E1Q8TCB6 317 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 GIPC3Q8TF64 312 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 HES4Q9HCC6 221 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 GPR84Q9NQS5 396 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 FAM206AQ9NX38 181 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 LAMP5Q9UJQ1 280 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 MINOS1-NBL1R4GNA1 71 aa11.7□□□□□ -0.54
MCF2L-220ENST00000464800 TMEM269A0A1B0GVZ9 245 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 PRODHO43272 600 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 DNAJC8O75937 253 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-220ENST00000464800 ACTA2P62736 377 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 ACTG2P63267 376 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 ACTC1P68032 377 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 ACTA1P68133 377 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 COL10A1Q03692 680 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 GINS1Q14691 196 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 LCN1P1Q5VSP4 162 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 GDPD3Q7L5L3 318 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 ARHGAP24Q8N264 748 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 CAPSLQ8WWF8 208 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 SLC22A13Q9Y226 551 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 RYR3Q15413 4870 aa11.69□□□□□ -0.54
MCF2L-220ENST00000464800 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 FAM90A22PA8MWA6 464 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 ATP8B1O43520 1251 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 DHRS3O75911 302 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 CST1P01037 141 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 RAP2AP10114 183 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 ALOX5APP20292 161 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 GYS2P54840 703 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 IL18R1Q13478 541 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 GK3PQ14409 553 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 KCTD18Q6PI47 426 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-220ENST00000464800 CPOQ8IVL8 374 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 LINC00482Q8N8I6 264 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 PBOV1Q9GZY1 135 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 LIN7BQ9HAP6 207 aa11.68□□□□□ -0.54
MCF2L-220ENST00000464800 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.68□□□□□ -0.54
MCF2L-220ENST00000464800 PQLC2LA1A4F0 135 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 ARRDC5A6NEK1 342 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 PSMD9O00233 223 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 IGLV3-1P01715 115 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 LPLP06858 475 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 MPZP25189 248 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 HCCSP53701 268 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 RPS7P62081 194 aaKnown RBP11.67□□□□□ -0.54
MCF2L-220ENST00000464800 ESRRGP62508 458 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 GNGT1P63211 74 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF829Q3KNS6 432 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-220ENST00000464800 ABCA11PQ4W5N1 156 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 SLC35D3Q5M8T2 416 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 CLVS2Q5SYC1 327 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 DEGS2Q6QHC5 323 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 ASRGL1Q7L266 308 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 TCF23Q7RTU1 214 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 TMEM179BQ7Z7N9 219 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF676Q8N7Q3 588 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 BBS1Q8NFJ9 593 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 NSL1Q96IY1 281 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 TEAD3Q99594 435 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms