RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SSX2Q16385 188 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 ZNF829Q3KNS6 432 aaPredicted RBP18.23■□□□□ 0.51
USP4-208ENST00000464168 CLVS2Q5SYC1 327 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 OR4F17Q8NGA8 305 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 RPS4Y2Q8TD47 263 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 PHF21AQ96BD5 680 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 FOXRED1Q96CU9 486 aaPredicted RBP18.23■□□□□ 0.51
USP4-208ENST00000464168 ASB9Q96DX5 294 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 NSL1Q96IY1 281 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 LRGUKQ96M69 825 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 OR4F4Q96R69 305 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 PRSS22Q9GZN4 317 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 ZNF556Q9HAH1 456 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 GPR173Q9NS66 373 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 AURKAIP1Q9NWT8 199 aaPredicted RBP18.23■□□□□ 0.51
USP4-208ENST00000464168 POLDIP2Q9Y2S7 368 aa18.23■□□□□ 0.51
USP4-208ENST00000464168 TBL2Q9Y4P3 447 aaKnown RBP18.23■□□□□ 0.51
USP4-208ENST00000464168 K7N7A8 449 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 GNGT2O14610 69 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 SRSF10O75494 262 aaKnown RBP18.22■□□□□ 0.51
USP4-208ENST00000464168 MPZP25189 248 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 RIDAP52758 137 aaKnown RBP18.22■□□□□ 0.51
USP4-208ENST00000464168 GYS2P54840 703 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 ERVK11-1P61568 191 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 LCN1P1Q5VSP4 162 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 ZNF626Q68DY1 528 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 Q6ZS46 218 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 ASRGL1Q7L266 308 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 OR11H6Q8NGC7 330 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 ASB17Q8WXJ9 295 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 OR5M11Q96RB7 305 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 TTTY10Q9BZA0 68 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 SLC25A19Q9HC21 320 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 ABCB10Q9NRK6 738 aa18.22■□□□□ 0.51
USP4-208ENST00000464168 MEX3AA1L020 520 aaKnown RBP18.21■□□□□ 0.51
USP4-208ENST00000464168 DLGAP1O14490 977 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 ZNF728P0DKX0 622 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 BLCAPP62952 87 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 GNGT1P63211 74 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 ANGPTL5Q86XS5 388 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 OR13D1Q8NGV5 346 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 CANT1Q8WVQ1 401 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 CCDC124Q96CT7 223 aaKnown RBP18.21■□□□□ 0.51
USP4-208ENST00000464168 TVP23BQ9NYZ1 205 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 PITPNC1Q9UKF7 332 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 IKZF2Q9UKS7 526 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 TMEM14AQ9Y6G1 99 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 V9GYS6 101 aa18.21■□□□□ 0.51
USP4-208ENST00000464168 A0A1B0GTI1 187 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 A6NIN4 97 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 RBP4P02753 201 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 ESRRGP62508 458 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 COL10A1Q03692 680 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 SNAPC1Q16533 368 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 TEX12Q9BXU0 123 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 SLC22A13Q9Y226 551 aa18.2■□□□□ 0.5
USP4-208ENST00000464168 KMT2CQ8NEZ4 4911 aaKnown RBP18.2■□□□□ 0.5
USP4-208ENST00000464168 COL7A1Q02388 2944 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 MAGEB4O15481 346 aaPredicted RBP18.19■□□□□ 0.5
USP4-208ENST00000464168 ZNF737O75373 536 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 E2F6O75461 281 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 IGHV1-8P0DP01 117 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 ANXA8P13928 327 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 JUNBP17275 347 aaPredicted RBP18.19■□□□□ 0.5
USP4-208ENST00000464168 DYNLT3P51808 116 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 FOXB2Q5VYV0 432 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 Q6ZSR3 168 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 ELMOD2Q8IZ81 293 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 ASCC1Q8N9N2 400 aaKnown RBP18.19■□□□□ 0.5
USP4-208ENST00000464168 WFDC9Q8NEX5 89 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 OR14K1Q8NGZ2 314 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 APOL4Q9BPW4 351 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 GTF2A1LQ9UNN4 478 aa18.19■□□□□ 0.5
USP4-208ENST00000464168 LOC110117498-PIK3R3F6TDL0 507 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 ATP8B1O43520 1251 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 PEX14O75381 377 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 T-ENOLP0DO92 83 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 IL24Q13007 206 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 DYNC1I2Q13409 638 aaKnown RBP18.18■□□□□ 0.5
USP4-208ENST00000464168 PKIBQ9C010 78 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 DNAJB9Q9UBS3 223 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 TENM3Q9P273 2699 aa18.18■□□□□ 0.5
USP4-208ENST00000464168 AQP12BA6NM10 295 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 F8VVB4 439 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 F8VWA3 439 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 CHRM2P08172 466 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 EDDM3BP56851 147 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 OR12D2P58182 307 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 TMEM95Q3KNT9 176 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 BCL2L15Q5TBC7 163 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 ZNF322Q6U7Q0 402 aaPredicted RBP18.17■□□□□ 0.5
USP4-208ENST00000464168 PLEKHG7Q6ZR37 379 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 TCF23Q7RTU1 214 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 AQP12AQ8IXF9 295 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 CNN2Q99439 309 aaKnown RBP18.17■□□□□ 0.5
USP4-208ENST00000464168 OCSTAMPQ9BR26 566 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 MOB1AQ9H8S9 216 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 OR52A1Q9UKL2 312 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 HILPDAQ9Y5L2 63 aa18.17■□□□□ 0.5
USP4-208ENST00000464168 R4GMQ9 66 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms