RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 GSC2O15499 205 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 ZNF737O75373 536 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 DUS4LO95620 317 aaKnown RBP13.87□□□□□ -0.19
HMGN1-210ENST00000464078 NRASP01111 189 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 PF4V1P10720 104 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 PIPP12273 146 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-210ENST00000464078 ERVK11-1P61568 191 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 ROM1Q03395 351 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 MINOS1Q5TGZ0 78 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 MUC13Q9H3R2 512 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 TAS2R1Q9NYW7 299 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 DNAJB9Q9UBS3 223 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 TAGLN3Q9UI15 199 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 MINOS1-NBL1R4GNA1 71 aa13.87□□□□□ -0.19
HMGN1-210ENST00000464078 DLGAP1O14490 977 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 SNX3O60493 162 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 ZNF254O75437 659 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 OR12D2P58182 307 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 EGFEM1PQ0D2K5 195 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 GINS1Q14691 196 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 ZNF829Q3KNS6 432 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-210ENST00000464078 HSP90B2PQ58FF3 399 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 TCTEX1D4Q5JR98 221 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 CLVS2Q5SYC1 327 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 CPOQ8IVL8 374 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 TEAD3Q99594 435 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 MROQ9BYG7 248 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-210ENST00000464078 OR14J1Q9UGF5 321 aa13.86□□□□□ -0.19
HMGN1-210ENST00000464078 A0A1W2PRX2 142 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 DHRS7CA6NNS2 312 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 E2F6O75461 281 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 HMGN1P05114 100 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 MEF2CQ06413 473 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-210ENST00000464078 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
HMGN1-210ENST00000464078 TCF23Q7RTU1 214 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 C16orf82Q7Z2V1 217 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 ZNF679Q8IYX0 411 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 ASCC1Q8N9N2 400 aaKnown RBP13.85□□□□□ -0.19
HMGN1-210ENST00000464078 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 GIPC3Q8TF64 312 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 ZNF714Q96N38 554 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 PKIBQ9C010 78 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 MOB1AQ9H8S9 216 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 ARL8BQ9NVJ2 186 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 SLC22A13Q9Y226 551 aa13.85□□□□□ -0.19
HMGN1-210ENST00000464078 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-210ENST00000464078 PRR32B1ATL7 298 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 TTRP02766 147 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 PF4P02776 101 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 RPS7P62081 194 aaKnown RBP13.84□□□□□ -0.19
HMGN1-210ENST00000464078 ACTA2P62736 377 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 ACTG2P63267 376 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 ACTC1P68032 377 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 ACTA1P68133 377 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 COL10A1Q03692 680 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 SLC34A1Q06495 639 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 IL24Q13007 206 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 OR8H2Q8N162 312 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 ARHGAP24Q8N264 748 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 ASB17Q8WXJ9 295 aa13.84□□□□□ -0.19
HMGN1-210ENST00000464078 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.84□□□□□ -0.19
HMGN1-210ENST00000464078 IGHV2-26A0A0B4J1V2 119 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 WI2-2373I1.2A0A1W2PRP0 233 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 H3BUI4 141 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 SRSF10O75494 262 aaKnown RBP13.83□□□□□ -0.2
HMGN1-210ENST00000464078 DNAJC8O75937 253 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-210ENST00000464078 JUNBP17275 347 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-210ENST00000464078 HCCSP53701 268 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 KRTAP10-11P60412 298 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 CDK5Q00535 292 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 MFGE8Q08431 387 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-210ENST00000464078 DYNC1I2Q13409 638 aaKnown RBP13.83□□□□□ -0.2
HMGN1-210ENST00000464078 IL18R1Q13478 541 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 Q6ZSR3 168 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 GDPD3Q7L5L3 318 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 DHFR2Q86XF0 187 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 AKR1E2Q96JD6 320 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 WWC2-AS2Q96NR7 200 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 LIN7BQ9HAP6 207 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 GPR173Q9NS66 373 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 HILPDAQ9Y5L2 63 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 LINC00312Q9Y6C7 94 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 TMEM14AQ9Y6G1 99 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 SESN1Q9Y6P5 492 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 V9GYS6 101 aa13.83□□□□□ -0.2
HMGN1-210ENST00000464078 TCRBV4S1A1TA0A5B7 111 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 PSMD9O00233 223 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 CHRM2P08172 466 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 RAP2AP10114 183 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 RIDAP52758 137 aaKnown RBP13.82□□□□□ -0.2
HMGN1-210ENST00000464078 EDDM3BP56851 147 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 APOFQ13790 326 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 ZBTB49Q6ZSB9 765 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 CCDC121Q6ZUS5 278 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 ASRGL1Q7L266 308 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 OR4X2Q8NGF9 303 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 MYDGFQ969H8 173 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms