RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ZNF239Q16600 458 aaKnown RBP16.11■□□□□ 0.17
HPS3-204ENST00000462030 FAM69BQ5VUD6 431 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 PLXDC2Q6UX71 529 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 LINC00469Q8N7U9 141 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 Q96M66 194 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 OXGR1Q96P68 337 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 OR51M1Q9H341 326 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 SPAG17Q6Q759 2223 aa16.11■□□□□ 0.17
HPS3-204ENST00000462030 PPP1CCP36873 323 aaKnown RBP16.1■□□□□ 0.17
HPS3-204ENST00000462030 CLDN17P56750 224 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 ACER2Q5QJU3 275 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 OR52M1Q8NGK5 317 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 RNF138Q8WVD3 245 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 PIGQQ9BRB3 760 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 NAA60Q9H7X0 242 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 METTL7AQ9H8H3 244 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 NXT1Q9UKK6 140 aaKnown RBP16.1■□□□□ 0.17
HPS3-204ENST00000462030 ANGPTL7O43827 346 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 GPR137BO60478 399 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 FXYD4P59646 89 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 NHLH2Q02577 135 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 ARL6IP1Q15041 203 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 PLXDC1Q8IUK5 500 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 EDARADDQ8WWZ3 215 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 DYRK2Q92630 601 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 TCEAL7Q9BRU2 100 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 AK3Q9UIJ7 227 aa16.1■□□□□ 0.17
HPS3-204ENST00000462030 TRBV23-1A0A0A0MS06 115 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 ZNF850A8MQ14 1090 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 DBHP09172 617 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 LMO1P25800 156 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 EIF3IQ13347 325 aaKnown RBP16.09■□□□□ 0.17
HPS3-204ENST00000462030 PPA1Q15181 289 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 TAF9Q16594 264 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 RSPO1Q2MKA7 263 aaPredicted RBP16.09■□□□□ 0.17
HPS3-204ENST00000462030 TMEM176BQ3YBM2 270 aaPredicted RBP16.09■□□□□ 0.17
HPS3-204ENST00000462030 PHLDA2Q53GA4 152 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 PHYHD1Q5SRE7 291 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 LRRC18Q8N456 261 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 RTN4IP1Q8WWV3 396 aaPredicted RBP16.09■□□□□ 0.17
HPS3-204ENST00000462030 MARS2Q96GW9 593 aaKnown RBP16.09■□□□□ 0.17
HPS3-204ENST00000462030 ADAMTS20P59510 1910 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 ZNF728P0DKX0 622 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 CTSSP25774 331 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 ASCL1P50553 236 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 CHAF1BQ13112 559 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 NCMAPQ5T1S8 102 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 RTL6Q6ICC9 239 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 C20orf196Q8IYI0 205 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 ZNF565Q8N9K5 539 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 OR1J1Q8NGS3 322 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 PP6455Q8WZ26 134 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 LMAN1LQ9HAT1 526 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 KCNJ16Q9NPI9 418 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 GPR173Q9NS66 373 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 TINAGQ9UJW2 476 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 KCNIP3Q9Y2W7 256 aa16.09■□□□□ 0.17
HPS3-204ENST00000462030 A0A0U1RQV5 110 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 DUX1O43812 170 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 HEXBP07686 556 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 CD27P26842 260 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 ZNF133P52736 654 aaPredicted RBP16.08■□□□□ 0.17
HPS3-204ENST00000462030 SUCLG1P53597 346 aaKnown RBP16.08■□□□□ 0.17
HPS3-204ENST00000462030 ENDOGQ14249 297 aaKnown RBP16.08■□□□□ 0.17
HPS3-204ENST00000462030 RHEBQ15382 184 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 ABCA11PQ4W5N1 156 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 TMEM182Q6ZP80 229 aaPredicted RBP16.08■□□□□ 0.17
HPS3-204ENST00000462030 OR5L1Q8NGL2 311 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 SLC35B3Q9H1N7 401 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 RFNGQ9Y644 331 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 EML6Q6ZMW3 1958 aa16.08■□□□□ 0.17
HPS3-204ENST00000462030 SDK1Q7Z5N4 2213 aa16.08■□□□□ 0.16
HPS3-204ENST00000462030 AP4M1O00189 453 aa16.08■□□□□ 0.16
HPS3-204ENST00000462030 SPRY1O43609 319 aaPredicted RBP16.08■□□□□ 0.16
HPS3-204ENST00000462030 MSX1P28360 303 aa16.08■□□□□ 0.16
HPS3-204ENST00000462030 OR2M3Q8NG83 312 aa16.08■□□□□ 0.16
HPS3-204ENST00000462030 MALSU1Q96EH3 234 aa16.08■□□□□ 0.16
HPS3-204ENST00000462030 AQP7P3A6NL99 342 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 PPIHO43447 177 aaKnown RBP16.07■□□□□ 0.16
HPS3-204ENST00000462030 MSR1P21757 451 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 EIF2S3P41091 472 aaKnown RBP16.07■□□□□ 0.16
HPS3-204ENST00000462030 PRSS12P56730 875 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 HNRNPKP61978 463 aaKnown RBP eCLIP16.07■□□□□ 0.16
HPS3-204ENST00000462030 BRICD5Q6PL45 260 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 FAM213BQ8TBF2 198 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 TCTEX1D2Q8WW35 142 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 GALNT14Q96FL9 552 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 RARRES2Q99969 163 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 WDR77Q9BQA1 342 aaPredicted RBP16.07■□□□□ 0.16
HPS3-204ENST00000462030 NECAP2Q9NVZ3 263 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 RCL1Q9Y2P8 373 aaKnown RBP16.07■□□□□ 0.16
HPS3-204ENST00000462030 FAM221AA4D161 298 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 H7C1Q1 480 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 OR2J2O76002 312 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 IGHV2-70P01814 119 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 S100PP25815 95 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 RPS23P62266 143 aaKnown RBP16.07■□□□□ 0.16
HPS3-204ENST00000462030 SNAI3Q3KNW1 292 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 FBXW12Q6X9E4 464 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 OR11L1Q8NGX0 322 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms