RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ASB13Q8WXK3 278 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 TOMM40LQ969M1 308 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 SPTSSAQ969W0 71 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 MARS2Q96GW9 593 aaKnown RBP13.55□□□□□ -0.24
LMNB1-203ENST00000460265 PRRT1Q99946 306 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 CHCHD2Q9Y6H1 151 aaPredicted RBP13.55□□□□□ -0.24
LMNB1-203ENST00000460265 FGF16O43320 207 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF205O95201 554 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 SERPINA5P05154 406 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 ACKR3P25106 362 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 DDTP30046 118 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 RGS19P49795 217 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 S100A10P60903 97 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 ZP4Q12836 540 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 DEGS2Q6QHC5 323 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 KCNG3Q8TAE7 436 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 PIGCQ92535 297 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF837Q96EG3 531 aaPredicted RBP13.55□□□□□ -0.24
LMNB1-203ENST00000460265 CALHM2Q9HA72 323 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 LRFN1Q9P244 771 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 TECTAO75443 2155 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 SLC16A14Q7RTX9 510 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 VASH2Q86V25 355 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 OR6X1Q8NH79 312 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 P4HTMQ9NXG6 502 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 CBR3O75828 277 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 DSCR4P56555 118 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF585AQ6P3V2 769 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 RTN4RL2Q86UN3 420 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 CLEC1AQ8NC01 280 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 GPX8Q8TED1 209 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 ARHGAP5-AS1Q96IT6 56 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF319Q9P2F9 582 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 IGHV1-45A0A0A0MS14 117 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 TEX13DA0A0J9YY54 714 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-203ENST00000460265 C7orf77A4D0Y5 90 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 UMODP07911 640 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 HOXB5P09067 269 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 ACACAQ13085 2346 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 TAF9Q16594 264 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 ACTBL2Q562R1 376 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 BIVMQ86UB2 503 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 C20orf196Q8IYI0 205 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 PIK3IP1Q96FE7 263 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 IP6K3Q96PC2 410 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 SLC25A21Q9BQT8 299 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-203ENST00000460265 EGLN1Q9GZT9 426 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 FAM206AQ9NX38 181 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 KLK13Q9UKR3 277 aa13.54□□□□□ -0.24
LMNB1-203ENST00000460265 LY6G6EA0A0G2JKS1 128 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 CD79AP11912 226 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 FXYD4P59646 89 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 C6orf15Q6UXA7 325 aaPredicted RBP13.53□□□□□ -0.24
LMNB1-203ENST00000460265 PEG10Q86TG7 708 aaKnown RBP13.53□□□□□ -0.24
LMNB1-203ENST00000460265 ARL6IP6Q8N6S5 226 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 OR10S1Q8NGN2 331 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 PHB2Q99623 299 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 U3KQA8 63 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 PCNX1Q96RV3 2341 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 SPRY1O43609 319 aaPredicted RBP13.53□□□□□ -0.24
LMNB1-203ENST00000460265 MED6O75586 246 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 SCGB1D2O95969 90 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 OPRM1P35372 400 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 CAV2P51636 162 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 DHRS2Q13268 280 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 GAMTQ14353 236 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 ESPL1Q14674 2120 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 SURF2Q15527 256 aaPredicted RBP13.53□□□□□ -0.24
LMNB1-203ENST00000460265 AWAT1Q58HT5 328 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF774Q6NX45 483 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 MRPL14Q6P1L8 145 aaKnown RBP13.53□□□□□ -0.24
LMNB1-203ENST00000460265 ADAMTS9Q9P2N4 1935 aa13.53□□□□□ -0.24
LMNB1-203ENST00000460265 MED13Q9UHV7 2174 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 AQP7P3A6NL99 342 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF850A8MQ14 1090 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 CD8AP01732 235 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 SLC25A4P12235 298 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 MPLP40238 635 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 MEF2DQ14814 521 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 KISS1Q15726 138 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 PCK2Q16822 640 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 DOK3Q7L591 496 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 SECTM1Q8WVN6 248 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 POM121Q96HA1 1249 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 OR10A2Q9H208 303 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 TCFL5Q9UL49 500 aa13.52□□□□□ -0.24
LMNB1-203ENST00000460265 A0A0G2JMM0 328 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 A0A1W2PPB8 328 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 A0A1W2PRS3 328 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 C5orf63A6NC05 138 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 GJE1A6NN92 205 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 KIR3DP1A8MWS1 328 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms