RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 MBP02144 154 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 CCL4P13236 92 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 KIR3DL2P43630 455 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 GAB4Q2WGN9 574 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 DHRS13Q6UX07 377 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 CLEC18CQ8NCF0 446 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 PGLYRP3Q96LB9 341 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 TUBG2Q9NRH3 451 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 CLEC1BQ9P126 229 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 RPH3ALQ9UNE2 315 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 RALGAPA2Q2PPJ7 1873 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 SURF2Q15527 256 aaPredicted RBP13.06□□□□□ -0.32
PTPRU-205ENST00000460170 BPIFCQ8NFQ6 507 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 AKR1E2Q96JD6 320 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 AHCTF1Q8WYP5 2266 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 VSIG8P0DPA2 414 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 RRASP10301 218 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
PTPRU-205ENST00000460170 OR2B8PP59922 312 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 FAM58AQ8N1B3 248 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
PTPRU-205ENST00000460170 COX5AP20674 150 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 DEFA6Q01524 100 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 SLC25A42Q86VD7 318 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 OR2M3Q8NG83 312 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 BOD1Q96IK1 185 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 DUSP15Q9H1R2 295 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 IGHV5-10-1A0A0J9YXX1 117 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 M0R1B8 84 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 PRSS12P56730 875 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 ERGIC1Q969X5 290 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 ZNF501Q96CX3 271 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 SCARF2Q96GP6 870 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 S1PR3Q99500 378 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 ANXA10Q9UJ72 324 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 CRHP06850 196 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 MIDNQ504T8 468 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 SEZ6L2Q6UXD5 910 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 HSD17B13Q7Z5P4 300 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 KISS1RQ969F8 398 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 C10orf35Q96D05 121 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 RASL12Q9NYN1 266 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 ERRFI1Q9UJM3 462 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 TMEM30CPA0ZSE6 113 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 HSBP1L1C9JCN9 74 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 MEOX1P50221 254 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 GUK1Q16774 197 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 FHL5Q5TD97 284 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 MOB1BQ7L9L4 216 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 CTHRC1Q96CG8 243 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 ADAT1Q9BUB4 502 aaKnown RBP13.05□□□□□ -0.32
PTPRU-205ENST00000460170 GHITMQ9H3K2 345 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 NIT2Q9NQR4 276 aa13.05□□□□□ -0.32
PTPRU-205ENST00000460170 CTSDP07339 412 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-205ENST00000460170 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 CA6P23280 308 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 CEBPEQ15744 281 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 ZNF766Q5HY98 468 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 OR4F5Q8NH21 305 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 OR4F4Q96R69 305 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 SHARPINQ9H0F6 387 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 CCL3P10147 92 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 INPP5JQ15735 1006 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-205ENST00000460170 ACOT6Q3I5F7 207 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-205ENST00000460170 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
PTPRU-205ENST00000460170 TAAR6Q96RI8 345 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 C3orf85A0A1B0GTC6 90 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 ONECUT2O95948 504 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 TCFL5Q9UL49 500 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 OR2A2Q6IF42 318 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 UBALD1Q8TB05 177 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 ADAT3Q96EY9 351 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-205ENST00000460170 ZNF236Q9UL36 1845 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 SPTBP11277 2137 aa13.04□□□□□ -0.32
PTPRU-205ENST00000460170 TSPAN2O60636 221 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ZP4Q12836 540 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 RGS7BPQ6MZT1 257 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CORO2AQ92828 525 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 WDR13Q9H1Z4 485 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CT45A6P0DMU7 189 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CT45A5P0DMU8 189 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CT45A7P0DMV0 189 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 KCNJ3P48549 501 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 SUB1P53999 127 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CT45A1Q5HYN5 189 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms