RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 GPR31O00270 319 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 CASKO14936 926 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 UPK3AO75631 287 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 ZNF432O94892 652 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 SYNGR4O95473 234 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 ABHD16AO95870 558 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 SERPINA3P01011 423 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 CCNOP22674 350 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 MAP2K3P46734 347 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 PPT1P50897 306 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 NANOS3P60323 173 aaKnown RBP9.09□□□□□ -0.95
HERC4-207ENST00000460168 ATP6V1FQ16864 119 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 C5orf64Q2M2E5 130 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 TMEM123Q8N131 208 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 OR52N5Q8NH56 324 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 ABHD4Q8TB40 342 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 ULBP2Q9BZM5 246 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 ELOVL3Q9HB03 270 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 RBFOX1Q9NWB1 397 aaKnown RBP9.09□□□□□ -0.95
HERC4-207ENST00000460168 CARHSP1Q9Y2V2 147 aaKnown RBP9.09□□□□□ -0.95
HERC4-207ENST00000460168 HSPB2A8KAH6 182 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 TNFSF8P32971 234 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 SELENOTP62341 195 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 DHODHQ02127 395 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 ZNF79Q15937 498 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 HSPB2Q16082 182 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 C3AR1Q16581 482 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 PCK2Q16822 640 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 AAED1Q7RTV5 226 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 CEACAM19Q7Z692 300 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 SPACA3Q8IXA5 215 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 STXBP6Q8NFX7 210 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 OR13C5Q8NGS8 318 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 OR2AJ1Q8NGZ0 328 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 RBM24Q9BX46 236 aaKnown RBP9.09□□□□□ -0.95
HERC4-207ENST00000460168 HIPK2Q9H2X6 1198 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 CENPMQ9NSP4 180 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 GAR1Q9NY12 217 aaKnown RBP9.09□□□□□ -0.95
HERC4-207ENST00000460168 SLC7A11Q9UPY5 501 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 RCE1Q9Y256 329 aa9.09□□□□□ -0.95
HERC4-207ENST00000460168 PHF3Q92576 2039 aaKnown RBP9.08□□□□□ -0.96
HERC4-207ENST00000460168 hCG_1809904A0A1W2PP81 198 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 A0A1W2PPE2 198 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 A0A1W2PR64 198 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SMIM30A4D0T7 59 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 A4D1N5 150 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 PLA2G10O15496 165 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 CD2P06729 351 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 ROM1Q03395 351 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 HNRNPA0Q13151 305 aaKnown RBP9.08□□□□□ -0.96
HERC4-207ENST00000460168 CLINT1Q14677 625 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 FCN2Q15485 313 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 ACSM3Q53FZ2 586 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 PHYHD1Q5SRE7 291 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 PLXDC2Q6UX71 529 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 OR5AK2Q8NH90 309 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 FNDC9Q8TBE3 224 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 TSEN15Q8WW01 171 aaKnown RBP9.08□□□□□ -0.96
HERC4-207ENST00000460168 TMEM54Q969K7 222 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SLC25A46Q96AG3 418 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 COMMD4Q9H0A8 199 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 FRRS1LQ9P0K9 344 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 LRP12Q9Y561 859 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 TNRC6AQ8NDV7 1962 aaKnown RBP9.08□□□□□ -0.96
HERC4-207ENST00000460168 H7C417 338 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SC5DO75845 299 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 WNT11O96014 354 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 HLA-DQB1P01920 261 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 CLEC3BP05452 202 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 CD1AP06126 327 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 MNDAP41218 407 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 ZNF84P51523 738 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 C10orf128Q5T292 105 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 FAM27D1Q5T7N8 215 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 BRICD5Q6PL45 260 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 IGFL3Q6UXB1 125 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.08□□□□□ -0.96
HERC4-207ENST00000460168 OR2G2Q8NGZ5 317 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 RNF128Q8TEB7 428 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 MED28Q9H204 178 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 NELFAQ9H3P2 528 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 CHODLQ9H9P2 273 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SPRR3Q9UBC9 169 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 CAMK2AQ9UQM7 478 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SPTBN4Q9H254 2564 aa9.08□□□□□ -0.96
HERC4-207ENST00000460168 SPENQ96T58 3664 aaKnown RBP9.08□□□□□ -0.96
HERC4-207ENST00000460168 A0A1B0GTH9 108 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 A0A1W2PPK0 400 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 FABP12A6NFH5 140 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 DHHO43323 396 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 H2BFMP0C1H6 154 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 NTF4P34130 210 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 COMPP49747 757 aaPredicted RBP9.07□□□□□ -0.96
HERC4-207ENST00000460168 MRPS10P82664 201 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms