RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 DBTP11182 482 aaKnown RBP13.26□□□□□ -0.29
COL7A1-203ENST00000459756 CCR9P51686 369 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 FUT6P51993 359 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF91Q05481 1191 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 IL24Q13007 206 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 UBE2V2Q15819 145 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 C1orf122Q6ZSJ8 110 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 CALHM1Q8IU99 346 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 EGFL6Q8IUX8 553 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 RDH10Q8IZV5 341 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 TMEM185AQ8NFB2 350 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 TRMT10AQ8TBZ6 339 aaKnown RBP13.26□□□□□ -0.29
COL7A1-203ENST00000459756 RDH12Q96NR8 316 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 HES4Q9HCC6 221 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 FRRS1LQ9P0K9 344 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 A0A1W2PQ09 198 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 M0R1W7 72 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 FADS2O95864 444 aaKnown RBP13.25□□□□□ -0.29
COL7A1-203ENST00000459756 PRDX2P32119 198 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 CAPZA1P52907 286 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 ERVK11-1P61568 191 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 GUCA2AQ02747 115 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 BLMHQ13867 455 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 CNN3Q15417 329 aaKnown RBP13.25□□□□□ -0.29
COL7A1-203ENST00000459756 C16orf87Q6PH81 154 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 ANGPTL5Q86XS5 388 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF561Q8N587 486 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 DHRSXQ8N5I4 330 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 TMEM86BQ8N661 226 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 CD177Q8N6Q3 437 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 Q8N7P7 452 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 NPRL2Q8WTW4 380 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 INPP5EQ9NRR6 644 aa13.25□□□□□ -0.29
COL7A1-203ENST00000459756 J3QLW9 94 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 MELTFP08582 738 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 HTR1AP08908 422 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF19P17023 458 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 AQP4P55087 323 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 NANOS3P60323 173 aaKnown RBP13.24□□□□□ -0.29
COL7A1-203ENST00000459756 RAB40BQ12829 278 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 GALEQ14376 348 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 NCR3LG1Q68D85 454 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 PDZD9Q8IXQ8 264 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 SYS1Q8N2H4 156 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 DNAAF1Q8NEP3 725 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 SSMEM1Q8WWF3 244 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 PELI1Q96FA3 418 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 BORCS8Q96FH0 119 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 C4orf36Q96KX1 117 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 ALG8Q9BVK2 526 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
COL7A1-203ENST00000459756 UNKLQ9H9P5 680 aaKnown RBP13.24□□□□□ -0.29
COL7A1-203ENST00000459756 ELL3Q9HB65 397 aaPredicted RBP13.24□□□□□ -0.29
COL7A1-203ENST00000459756 SIRT7Q9NRC8 400 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 RPL36Q9Y3U8 105 aaKnown RBP13.24□□□□□ -0.29
COL7A1-203ENST00000459756 POMT1Q9Y6A1 747 aa13.24□□□□□ -0.29
COL7A1-203ENST00000459756 IGKV1-27A0A075B6S5 117 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 A0A0U1RQK1 487 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 KNG1P01042 644 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 IGHA1P01876 353 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF20P17024 532 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 EEF1B2P24534 225 aaKnown RBP13.23□□□□□ -0.29
COL7A1-203ENST00000459756 RBP2P50120 134 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 TTC23Q5W5X9 447 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 UTS2BQ765I0 119 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 LHFPL3Q86UP9 236 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 TBC1D15Q8TC07 691 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 ADAT3Q96EY9 351 aaPredicted RBP13.23□□□□□ -0.29
COL7A1-203ENST00000459756 CEP19Q96LK0 163 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 AMBNQ9NP70 447 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
COL7A1-203ENST00000459756 MTCH1Q9NZJ7 389 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 HHLA2Q9UM44 414 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 MYRFQ9Y2G1 1151 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 CAB39Q9Y376 341 aaPredicted RBP13.23□□□□□ -0.29
COL7A1-203ENST00000459756 FAM96BQ9Y3D0 163 aa13.23□□□□□ -0.29
COL7A1-203ENST00000459756 A0A1W2PPH5 198 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 OR4C45A6NMZ5 311 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 RNASEK-C17orf49H0YIS7 233 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 RPSAP08865 295 aaKnown RBP13.22□□□□□ -0.29
COL7A1-203ENST00000459756 PRKACBP22694 351 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 CAPGP40121 348 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 RPL31P62899 125 aaKnown RBP13.22□□□□□ -0.29
COL7A1-203ENST00000459756 ADARB1P78563 741 aaKnown RBP13.22□□□□□ -0.29
COL7A1-203ENST00000459756 MRPL28Q13084 256 aaKnown RBP13.22□□□□□ -0.29
COL7A1-203ENST00000459756 ALKBH1Q13686 389 aaKnown RBP13.22□□□□□ -0.29
COL7A1-203ENST00000459756 KLHL22Q53GT1 634 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF691Q5VV52 312 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 SLC25A26Q70HW3 274 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 FAM185AQ8N0U4 392 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 BATF2Q8N1L9 274 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 OR5D13Q8NGL4 314 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 CNIH3Q8TBE1 160 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 TNFRSF14Q92956 283 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 SPSB1Q96BD6 273 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 FGGYQ96C11 551 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 VCX3BQ9H321 246 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms