RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 IKZF1Q13422 519 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 CDK5R1Q15078 307 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 AHSA2Q719I0 299 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 CALHM1Q8IU99 346 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 CMTM4Q8IZR5 234 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 BPIFB2Q8N4F0 458 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 ZNF561Q8N587 486 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 FAM216BQ8N7L0 139 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 OR51A4Q8NGJ6 313 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 OR10AC1Q8NH08 325 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 DACT3Q96B18 629 aaPredicted RBP13.4□□□□□ -0.26
CD28-203ENST00000458610 UPRTQ96BW1 309 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 CEP19Q96LK0 163 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 SLC25A10Q9UBX3 287 aaPredicted RBP13.4□□□□□ -0.26
CD28-203ENST00000458610 CLEC2DQ9UHP7 191 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 ZNF281Q9Y2X9 895 aa13.4□□□□□ -0.26
CD28-203ENST00000458610 RFPL4AA6NLU0 287 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 C22orf46C9J442 243 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 RFPL4AL1F8VTS6 287 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 ATP6V1G2O95670 118 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 KNG1P01042 644 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 AMY2BP19961 511 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 PRDX2P32119 198 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 CAV3P56539 151 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 ERVK11-1P61568 191 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 METTL11BQ5VVY1 283 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 RNLSQ5VYX0 342 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 LAIR2Q6ISS4 152 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 IZUMO2Q6UXV1 221 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 RBMS3Q6XE24 437 aaKnown RBP13.39□□□□□ -0.27
CD28-203ENST00000458610 SLC25A26Q70HW3 274 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 OR13C9Q8NGT0 318 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 SMIM19Q96E16 107 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 GAFA1Q96PS6 74 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 ANKRD60Q9BZ19 345 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 RHOFQ9HBH0 211 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 HES4Q9HCC6 221 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 SMURF1Q9HCE7 757 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 GLS2Q9UI32 602 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 RPUSD1Q9UJJ7 312 aaKnown RBP13.39□□□□□ -0.27
CD28-203ENST00000458610 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
CD28-203ENST00000458610 IGKV1D-17A0A075B6S4 117 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 IGKV1-27A0A075B6S5 117 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 IGKV1-9A0A0C4DH69 117 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 PTGES3LE9PB15 166 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 SULT1B1O43704 296 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 FSHBP01225 129 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 CHRM2P08172 466 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 NDUFB7P17568 137 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 RAB3AP20336 220 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 MYF6P23409 242 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 CAPZA1P52907 286 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 WNT4P56705 351 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 FGF12P61328 243 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 USP43Q70EL4 1123 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 RPS4Y2Q8TD47 263 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 H1FXQ92522 213 aaKnown RBP13.38□□□□□ -0.27
CD28-203ENST00000458610 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 DCTN5Q9BTE1 182 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 MS4A7Q9GZW8 240 aaPredicted RBP13.38□□□□□ -0.27
CD28-203ENST00000458610 SEBOXQ9HB31 216 aaPredicted RBP13.38□□□□□ -0.27
CD28-203ENST00000458610 FKBP14Q9NWM8 211 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 ZNF222Q9UK12 451 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
CD28-203ENST00000458610 TRBV23-1A0A0A0MS06 115 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 TOX4O94842 621 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 PLATP00750 562 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 CD1AP06126 327 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 CDK1P06493 297 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 HCKP08631 526 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
CD28-203ENST00000458610 VHLP40337 213 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 POU3F4P49335 361 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 PDZK1IP1Q13113 114 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 BLMHQ13867 455 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 PDCD1Q15116 288 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 DGUOKQ16854 277 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 DMKNQ6E0U4 476 aaPredicted RBP13.37□□□□□ -0.27
CD28-203ENST00000458610 SAXO1Q8IYX7 474 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 NANOGP1Q8N7R0 232 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 LY6G5BQ8NDX9 201 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 TMEM185AQ8NFB2 350 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 THRSPQ92748 146 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 GHSRQ92847 366 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 SLAMF9Q96A28 289 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 MND1Q9BWT6 205 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 CDCA4Q9BXL8 241 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 FAM234AQ9H0X4 552 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 MTCH1Q9NZJ7 389 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 RAB26Q9ULW5 256 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 MAB21L2Q9Y586 359 aa13.37□□□□□ -0.27
CD28-203ENST00000458610 KPTNQ9Y664 436 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms