RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 OR11L1Q8NGX0 322 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 FNDC9Q8TBE3 224 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 Q96M66 194 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 C1orf123Q9NWV4 160 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 POMT1Q9Y6A1 747 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 A0A0J9YW62 118 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 ZNF850A8MQ14 1090 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 TLX3O43711 291 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-203ENST00000458591 NME2P1O60361 137 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 OR5H8P0DN80 308 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 DAOP14920 347 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 CPT2P23786 658 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 CTSSP25774 331 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 PAX6P26367 422 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 PIGPP57054 158 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 LSM6P62312 80 aaKnown RBP12.32□□□□□ -0.44
SCFD1-203ENST00000458591 COL19A1Q14993 1142 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 SLC16A14Q7RTX9 510 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 PPP1R3BQ86XI6 285 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 C15orf54Q8N8G6 183 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 OR9K2Q8NGE7 335 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 AKR7LQ8NHP1 331 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 TMEM54Q969K7 222 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 PRRX2Q99811 253 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 ANXA10Q9UJ72 324 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 PADI1Q9ULC6 663 aa12.32□□□□□ -0.44
SCFD1-203ENST00000458591 IGKV1-12A0A0C4DH73 117 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
SCFD1-203ENST00000458591 DEDDO75618 318 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 IGKV1D-12P01611 117 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 MBPP02686 304 aaPredicted RBP12.31□□□□□ -0.44
SCFD1-203ENST00000458591 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 PPT1P50897 306 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 FGFBP3Q8TAT2 258 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 C20orf24Q9BUV8 137 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 ULBP2Q9BZM5 246 aa12.31□□□□□ -0.44
SCFD1-203ENST00000458591 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.444e-7■■■■■ 32.6
SCFD1-203ENST00000458591 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 SERPINE3A8MV23 424 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 FAM157AC9JC47 383 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 ALDH3B1P43353 468 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 SULT1A2P50226 295 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 ZNF84P51523 738 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 MRPL14Q6P1L8 145 aaKnown RBP12.3□□□□□ -0.44
SCFD1-203ENST00000458591 PLXDC2Q6UX71 529 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 Q6ZPA2 131 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 PARP11Q9NR21 331 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 ZDHHC8Q9ULC8 765 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 CEP192Q8TEP8 1941 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 A0A0U1RQV5 110 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 C1orf196B1AJZ1 125 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 CD5P06127 495 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 SPINK2P20155 84 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 PTAFRP25105 342 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 RSU1Q15404 277 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 HMGN3Q15651 99 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 OR5L1Q8NGL2 311 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 SLC25A43Q8WUT9 341 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-203ENST00000458591 SH3BGRL3Q9H299 93 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 EDARQ9UNE0 448 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 KPTNQ9Y664 436 aa12.3□□□□□ -0.44
SCFD1-203ENST00000458591 COLCA2A8K830 154 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 EIF3GO75821 320 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 CST4P01036 141 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 S100A8P05109 93 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 S100A9P06702 114 aaKnown RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 UMODP07911 640 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 SMIM6P0DI80 62 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 CBR1P16152 277 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 DVL1P1P54792 670 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 C10orf128Q5T292 105 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 KIRREL1Q96J84 757 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 CCDC187A0A096LP49 1063 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 LCATP04180 440 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 CCL4P13236 92 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 B4GALT1P15291 398 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 HIST1H3AP68431 136 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 NHLH2Q02577 135 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 HIST2H3PS2Q5TEC6 136 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 NSUN5P2Q63ZY6 315 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 HIST2H3AQ71DI3 136 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 PP6455Q8WZ26 134 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms