RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 VMA21Q3ZAQ7 101 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 CMTM3Q96MX0 182 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 ZNF32P17041 273 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 PRDM7Q9NQW5 492 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 MKRN2OSH3BPM6 223 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 CTSVO60911 334 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 CT62P0C5K7 136 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 CD200P41217 278 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 CRYBB2P43320 205 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 OR8D4Q8NGM9 314 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 GPR137Q96N19 417 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 CD300CQ08708 224 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 HDGFL3Q9Y3E1 203 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 IGHV3OR15-7A0A075B7D8 119 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 FZD6O60353 706 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 BCL3P20749 454 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 C12orf73Q69YU5 71 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 TP53I13Q8NBR0 393 aaPredicted RBP17.51■□□□□ 0.39
SNX27-204ENST00000458013 CDKN2AP42771 156 aaKnown RBP17.5■□□□□ 0.39
SNX27-204ENST00000458013 TNXAQ16473 311 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 GGNBP1Q5YKI7 109 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 DNAJB12Q9NXW2 375 aaKnown RBP17.5■□□□□ 0.39
SNX27-204ENST00000458013 TMEFF2Q9UIK5 374 aaPredicted RBP17.5■□□□□ 0.39
SNX27-204ENST00000458013 SELENOPP49908 381 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 ZNF260Q3ZCT1 412 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 ANKRD33Q7Z3H0 272 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 FLYWCH2Q96CP2 140 aaKnown RBP17.5■□□□□ 0.39
SNX27-204ENST00000458013 SLC17A2O00624 439 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 IGHA1P01876 353 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 IGHA2P01877 340 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 FUT3P21217 361 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 C17orf47Q8NEP4 570 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 OR10AC1Q8NH08 325 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 BTAF1O14981 1849 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 A0A0B4J2E0 115 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 A0A1B0GX12 115 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 CDC20Q12834 499 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 HLXQ14774 488 aaPredicted RBP17.5■□□□□ 0.39
SNX27-204ENST00000458013 ZBTB37Q5TC79 503 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 TIPARPQ7Z3E1 657 aaKnown RBP17.5■□□□□ 0.39
SNX27-204ENST00000458013 CLRN3Q8NCR9 226 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 WASHC3Q9Y3C0 194 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 PPIL1Q9Y3C6 166 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 TRBV5-4A0A0C4DH59 114 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 A0A1B0GTQ1 180 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 OR4F17Q8NGA8 305 aa17.5■□□□□ 0.39
SNX27-204ENST00000458013 FCN1O00602 326 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 PNLIPRP3Q17RR3 467 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 FAM109BQ6ICB4 259 aaPredicted RBP17.49■□□□□ 0.39
SNX27-204ENST00000458013 UQCC1Q9NVA1 299 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 PCOLCE2Q9UKZ9 415 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 SPTY2D1-AS1A0A0U1RR47 76 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 EPPINO95925 133 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 TTRP02766 147 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 PTGFRP43088 359 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 PRICKLE4Q2TBC4 344 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 TCTE3Q8IZS6 198 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 OR10D3Q8NH80 312 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 PRRX2Q99811 253 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 TMEM204Q9BSN7 226 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 TMEM140Q9NV12 185 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 EDARADDQ8WWZ3 215 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 MMP26Q9NRE1 261 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
SNX27-204ENST00000458013 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 CTAG2O75638 210 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 HIST1H1DP16402 221 aaKnown RBP17.49■□□□□ 0.39
SNX27-204ENST00000458013 HTR1DP28221 377 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 NCMAPQ5T1S8 102 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 YTHDF2Q9Y5A9 579 aaKnown RBP17.49■□□□□ 0.39
SNX27-204ENST00000458013 ARRDC5A6NEK1 342 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 SNRPCP09234 159 aaKnown RBP17.49■□□□□ 0.39
SNX27-204ENST00000458013 COL9A1P20849 921 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 SLC16A13Q7RTY0 426 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 SIGLEC7Q9Y286 467 aa17.49■□□□□ 0.39
SNX27-204ENST00000458013 K7ESF4 209 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 DAOP14920 347 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 ZP3P21754 424 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 TNFAIP6P98066 277 aaPredicted RBP17.48■□□□□ 0.39
SNX27-204ENST00000458013 SLC35E4Q6ICL7 350 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 WFDC3Q8IUB2 231 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 LINC01555Q8NAE3 123 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 COA4Q9NYJ1 87 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 SFT2D2O95562 160 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 CD40P25942 277 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 PRSS3P2Q8NHM4 247 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 TM4SF19Q96DZ7 209 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 EAF1Q96JC9 268 aaPredicted RBP17.48■□□□□ 0.39
SNX27-204ENST00000458013 UBTD1Q9HAC8 227 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 HYAL1Q12794 435 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 MRM1Q6IN84 353 aaKnown RBP17.48■□□□□ 0.39
SNX27-204ENST00000458013 DNPH1O43598 174 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 CA5BP1Q8WTZ4 195 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 TOX3O15405 576 aaPredicted RBP17.48■□□□□ 0.39
SNX27-204ENST00000458013 OR3A1P47881 315 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 ABI3BPQ7Z7G0 1075 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 SLC26A1Q9H2B4 701 aa17.48■□□□□ 0.39
SNX27-204ENST00000458013 SERPINE3A8MV23 424 aa17.47■□□□□ 0.39
SNX27-204ENST00000458013 CCDC190Q86UF4 302 aa17.47■□□□□ 0.39
SNX27-204ENST00000458013 TMEM208Q9BTX3 173 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms