RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 DUX4L3P0CJ86 424 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4L4P0CJ87 422 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4L5P0CJ88 424 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4L6P0CJ89 424 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4L7P0CJ90 424 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 PRKACBP22694 351 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 CPT2P23786 658 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 GABRA2P47869 451 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 POU3F4P49335 361 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 RBP2P50120 134 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 WNT4P56705 351 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4L9Q6RFH8 374 aaPredicted RBP8.39□□□□□ -1.07
RFX3-210ENST00000457373 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 UTS2BQ765I0 119 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 SLC36A1Q7Z2H8 476 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 SERPINA12Q8IW75 414 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 POC1AQ8NBT0 407 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 OR4M2Q8NGB6 313 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 OR13C5Q8NGS8 318 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 GPR148Q8TDV2 347 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 RGP1Q92546 391 aaPredicted RBP8.39□□□□□ -1.07
RFX3-210ENST00000457373 RFT1Q96AA3 541 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 SMIM19Q96E16 107 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 SPACA5Q96QH8 159 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 TMPRSS13Q9BYE2 586 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 CCDC90BQ9GZT6 254 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 ZCCHC4Q9H5U6 513 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 C7orf69Q9H7B7 122 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 PAK1IP1Q9NWT1 392 aaPredicted RBP8.39□□□□□ -1.07
RFX3-210ENST00000457373 NLKQ9UBE8 527 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4Q9UBX2 424 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 POLDIP2Q9Y2S7 368 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 ZNF281Q9Y2X9 895 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 PCDHGB5Q9Y5G0 923 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.38□□□□□ -1.07
RFX3-210ENST00000457373 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 LOC105371242A0A075B767 164 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 NKX6-3A6NJ46 265 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 OR2AT4A6NND4 320 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 DVL1O14640 695 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 NDUFB3O43676 98 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 HCKP08631 526 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 PGA5P0DJD9 388 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 PSG2P11465 335 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 SRD5A1P18405 259 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 AMY2BP19961 511 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 NPY4RP50391 375 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 MTCP1P56278 107 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 TAS2R43P59537 309 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 SUMO1P63165 101 aaKnown RBP8.38□□□□□ -1.07
RFX3-210ENST00000457373 SLC35A2P78381 396 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 IL24Q13007 206 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 IKZF1Q13422 519 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 DOC2BQ14184 412 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 STUMQ69YW2 141 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 DMKNQ6E0U4 476 aaPredicted RBP8.38□□□□□ -1.07
RFX3-210ENST00000457373 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 ACP7Q6ZNF0 438 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 LHFPL2Q6ZUX7 228 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 SLC25A26Q70HW3 274 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 RNF144BQ7Z419 303 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 FGFRL1Q8N441 504 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 FAM216BQ8N7L0 139 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 ZNF485Q8NCK3 441 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 DNAAF1Q8NEP3 725 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 OR5D14Q8NGL3 314 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 RPS4Y2Q8TD47 263 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 RAB40AQ8WXH6 277 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 ST8SIA4Q92187 359 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 GHSRQ92847 366 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 SLAMF9Q96A28 289 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 C12orf43Q96C57 262 aaKnown RBP8.38□□□□□ -1.07
RFX3-210ENST00000457373 OPALINQ96PE5 141 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 NUDT16L1Q9BRJ7 211 aaKnown RBP8.38□□□□□ -1.07
RFX3-210ENST00000457373 MND1Q9BWT6 205 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 PKIBQ9C010 78 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 NEK6Q9HC98 313 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 SMURF1Q9HCE7 757 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 RASL12Q9NYN1 266 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 OR14J1Q9UGF5 321 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 INSIG2Q9Y5U4 225 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
RFX3-210ENST00000457373 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
RFX3-210ENST00000457373 PPIAL4CA0A0B4J2A2 164 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 IGHV2-70DA0A0C4DH43 119 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 J3QLI3 93 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 SPRY1O43609 319 aaPredicted RBP8.37□□□□□ -1.07
RFX3-210ENST00000457373 RGS10O43665 173 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 SULT1B1O43704 296 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 FCN3O75636 299 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 NXPH2O95156 264 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 CYB5AP00167 134 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 MT-ND2P03891 347 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 CD2P06729 351 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 FAM157CP0CG43 387 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 CALCBP10092 127 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 SELLP14151 372 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 ADRA2CP18825 462 aa8.37□□□□□ -1.07
RFX3-210ENST00000457373 CELP19835 753 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms