RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 F8VVB4 439 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 F8VWA3 439 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 NDUFA2O43678 99 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 FCN3O75636 299 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 INMTO95050 263 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 PLATP00750 562 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 IGKV1D-12P01611 117 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 OCMP0CE72 109 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-215ENST00000457039 PSMA1P25786 263 aaKnown RBP11.78□□□□□ -0.52
SMPD4-215ENST00000457039 GABRA5P31644 462 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 POU3F4P49335 361 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 GMFBP60983 142 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 PPP3R1P63098 170 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 FAM27D1Q5T7N8 215 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 ATPAF1Q5TC12 328 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-215ENST00000457039 ACP7Q6ZNF0 438 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 LYPD6Q86Y78 171 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 TMEM203Q969S6 136 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 RFT1Q96AA3 541 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 TMIGD2Q96BF3 282 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 NEIL1Q96FI4 390 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-215ENST00000457039 PPIL3Q9H2H8 161 aaKnown RBP11.78□□□□□ -0.52
SMPD4-215ENST00000457039 SNTG1Q9NSN8 517 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 NDUFB11Q9NX14 153 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
SMPD4-215ENST00000457039 POLR3KQ9Y2Y1 108 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-215ENST00000457039 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.529e-7■■■□□ 17.4
SMPD4-215ENST00000457039 A0A1B0GW55 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 TRIM64CA6NLI5 447 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 KIAA1324LA8MWY0 1029 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-215ENST00000457039 GABRPO00591 440 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-215ENST00000457039 KDM4BO94953 1096 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 MSMBP08118 114 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 UCHL1P09936 223 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 PSG2P11465 335 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 ZFP36P26651 326 aaKnown RBP11.77□□□□□ -0.53
SMPD4-215ENST00000457039 BDKRB2P30411 391 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 FABP5Q01469 135 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 SYT6Q5T7P8 510 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-215ENST00000457039 CD200R1LQ6Q8B3 271 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-215ENST00000457039 ZNF788Q6ZQV5 615 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 CEACAM19Q7Z692 300 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 MKXQ8IYA7 352 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 SAXO1Q8IYX7 474 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 BATF2Q8N1L9 274 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 ZSCAN4Q8NAM6 433 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-215ENST00000457039 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 OR5T2Q8NGG2 359 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 OR5D18Q8NGL1 313 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 CEP19Q96LK0 163 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DNTTIP1Q9H147 329 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 CKLFQ9UBR5 152 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DNAJB11Q9UBS4 358 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 DUX4Q9UBX2 424 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 SVEP1Q4LDE5 3571 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 MTORP42345 2549 aa11.77□□□□□ -0.53
SMPD4-215ENST00000457039 IGKV1D-17A0A075B6S4 117 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 A0A087WXM4 84 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 OR2AT4A6NND4 320 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 CCRL2O00421 344 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 MAGEB3O15480 346 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 ADAM20O43506 726 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 RGS9O75916 674 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-215ENST00000457039 NXPH2O95156 264 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 TGFAP01135 160 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 TFF1P04155 84 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 BCL3P20749 454 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 PSMB9P28065 219 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 NPBWR2P48146 333 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 PITPNBP48739 271 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 DVL1P1P54792 670 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-215ENST00000457039 SMIM21Q3B7S5 101 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 DDI2Q5TDH0 399 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 LRRTM1Q86UE6 522 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 Q8IYB0 196 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 PXT1Q8NFP0 134 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 OR8B3Q8NGG8 313 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 OR51F2Q8NH61 342 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 PHYHIPQ92561 330 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 CPNE2Q96FN4 548 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-215ENST00000457039 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 OR8B2Q96RD0 313 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 CCL13Q99616 98 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 SMURF1Q9HCE7 757 aa11.76□□□□□ -0.53
SMPD4-215ENST00000457039 MALRD1Q5VYJ5 2156 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 TMPRSS2O15393 492 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 PHF1O43189 567 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 FOXH1O75593 365 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 MAS1P04201 325 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms