RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 GABRR1P24046 479 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 HTR5AP47898 357 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 CNN3Q15417 329 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 TMEM88Q6PEY1 159 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 PLXDC2Q6UX71 529 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 PUSL1Q8N0Z8 303 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 SVBPQ8N300 66 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 ZNF845Q96IR2 970 aaPredicted RBP15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 DDA1Q9BW61 102 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 COL25A1Q9BXS0 654 aaPredicted RBP15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 STRADBQ9C0K7 418 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 PLEKHJ1Q9NW61 149 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 MLXQ9UH92 298 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 CSAG2Q9Y5P2 127 aa15.98■□□□□ 0.15
SEMA3B-209ENST00000456560 FAM230AA0A1W2PPH8 454 aa15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 ANGPTL7O43827 346 aa15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 ADAP1O75689 374 aa15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 SERPINA5P05154 406 aa15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 RPUSD3Q6P087 351 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 HAGHLQ6PII5 290 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 ZSCAN4Q8NAM6 433 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 PRR13Q9NZ81 148 aa15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 FBXO9Q9UK97 447 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 HSF4Q9ULV5 492 aa15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 KLF2Q9Y5W3 355 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-209ENST00000456560 TEX13DA0A0J9YY54 714 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 TERTO14746 1132 aaKnown RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 LYL1P12980 280 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 CTAG1AP78358 180 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 LDLRAD3Q86YD5 345 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 SKA3Q8IX90 412 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 ZNF100Q8IYN0 542 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 CPNE4Q96A23 557 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 TMEM45BQ96B21 275 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 HDHD3Q9BSH5 251 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 ZNF391Q9UJN7 358 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 F8VVB4 439 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 F8VWA3 439 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 KCNAB3O43448 404 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 SPRY1O43609 319 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 F10P00742 488 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 H2AFB1P0C5Y9 115 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 AKR1D1P51857 326 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 PCBD1P61457 104 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 RSU1Q15404 277 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 GUCA2BQ16661 112 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 NKAPLQ5M9Q1 402 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 ABHD3Q8WU67 409 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 CPNE2Q96FN4 548 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 THOC3Q96J01 351 aaKnown RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 RGCCQ9H4X1 137 aa15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 ZNF701Q9NV72 531 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-209ENST00000456560 hCG_38984A0A1B0GV85 526 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 C9orf172C9J069 976 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 MMP7P09237 267 aaPredicted RBP15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 PGAM2P15259 253 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 RPL35P42766 123 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 PRSS12P56730 875 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 IL15RAQ13261 267 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 SPINK14Q6IE38 97 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 LHFPL2Q6ZUX7 228 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 DCUN1D4Q92564 292 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 RRNAD1Q96FB5 475 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 DOCK10Q96BY6 2186 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 WDFY3Q8IZQ1 3526 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 CUL9Q8IWT3 2517 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 NRASP01111 189 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 RBP2P50120 134 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 FAM3AP98173 230 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 HFEQ30201 348 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 PIK3IP1Q96FE7 263 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 OR10C1Q96KK4 312 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 FAAP24Q9BTP7 215 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 ADAT1Q9BUB4 502 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 DECR2Q9NUI1 292 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 LRFN1Q9P244 771 aa15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 BOKQ9UMX3 212 aaPredicted RBP15.95■□□□□ 0.14
SEMA3B-209ENST00000456560 CNTRLQ7Z7A1 2325 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 LINC01387J3KSC0 135 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 CSTBP04080 98 aaKnown RBP15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 ADCYAP1P18509 176 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 PTGER4P35408 488 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF92Q03936 586 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 STK11Q15831 433 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 TAF9Q16594 264 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 POC1AQ8NBT0 407 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 STOML3Q8TAV4 291 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 BORCS8Q96FH0 119 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 C2orf50Q96LR7 162 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF581Q9P0T4 197 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 EDARQ9UNE0 448 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 IGKV3D-15A0A087WSY6 115 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 IGKV1-12A0A0C4DH73 117 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 PRR33A8MZF0 331 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 FGF16O43320 207 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 IGKV1D-12P01611 117 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 PVALBP20472 110 aaPredicted RBP15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 ECI1P42126 302 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 PRSS54Q6PEW0 395 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 261.4 ms