RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FUT6P51993 359 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 KLF3P57682 345 aaPredicted RBP4.46□□□□□ -1.69
PCDH9-203ENST00000456367 ERVFRD-1P60508 538 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 UBE2NP61088 152 aaKnown RBP4.46□□□□□ -1.69
PCDH9-203ENST00000456367 NTHL1P78549 312 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 LCN2P80188 198 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.69
PCDH9-203ENST00000456367 B4GALNT1Q00973 533 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 THSD4Q6ZMP0 1018 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 FA2HQ7L5A8 372 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 RBMXL3Q8N7X1 1067 aaKnown RBP4.46□□□□□ -1.69
PCDH9-203ENST00000456367 OR51H1Q8NH63 302 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 MRPL38Q96DV4 380 aaKnown RBP4.46□□□□□ -1.69
PCDH9-203ENST00000456367 SLC25A38Q96DW6 304 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 ARHGAP5-AS1Q96IT6 56 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 SGIP1Q9BQI5 828 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 SLC46A2Q9BY10 475 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 SLC45A2Q9UMX9 530 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 TRAV34A0A0B4J273 112 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM202A6NGA9 273 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 H3BNC9 293 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 SPINT2O43291 252 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TIMP1P01033 207 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 EN2P19622 333 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CHRNB4P30926 498 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CHRNA7P36544 502 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 GNG10P50151 68 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 FUT7Q11130 342 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 HERPUD1Q15011 391 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 JOSD1Q15040 202 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 SHBQ15464 509 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CLEC12BQ2HXU8 276 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 C2orf27AQ580R0 203 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM97Q5BJF2 176 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 FAM69BQ5VUD6 431 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 LANCL3Q6ZV70 420 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 PRR22Q8IZ63 422 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 LILRA3Q8N6C8 439 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 METTL27Q8N6F8 245 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 OR10G4Q8NGN3 311 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 OR10G9Q8NGN4 311 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 OR10G7Q8NGN6 311 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 VN1R17PQ8TDU5 208 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 R3HDM4Q96D70 268 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 PGLYRP3Q96LB9 341 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 RNF2Q99496 336 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 IGFLR1Q9H665 355 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 C20orf141Q9NUB4 165 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CISD1Q9NZ45 108 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 FRRS1LQ9P0K9 344 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ICAM5Q9UMF0 924 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 GPR132Q9UNW8 380 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TRPM3Q9HCF6 1732 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 GAGE10A6NGK3 116 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 NDUFS8O00217 210 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 GLB1P16278 677 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 AGAP20933 346 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TNFSF4P23510 183 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CASP6P55212 293 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CLDN17P56750 224 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TCTAP57738 103 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 NUTF2P61970 127 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF141Q15928 474 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 BHLHA9Q7RTU4 235 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 MYPOPQ86VE0 399 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 BPIFA4PQ86YQ2 179 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 SLC35E1Q96K37 410 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ANXA10Q9UJ72 324 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TUBD1Q9UJT1 453 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 HSPB8Q9UJY1 196 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 PTRH2Q9Y3E5 179 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF816-ZNF321PA0A0X1KG74 233 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 M0R135 149 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 M0R2Z0 102 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ALOX12BO75342 701 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 OPRM1P35372 400 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ACAA2P42765 397 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 GNG4P50150 75 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 DYNLT3P51808 116 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 RHOBP62745 196 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 YBX1P67809 324 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TNFRSF9Q07011 255 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 EIF3IQ13347 325 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM255AQ5JRV8 349 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF506Q5JVG8 444 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 C16orf82Q7Z2V1 217 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 MAML2Q8IZL2 1156 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM251Q8N6I4 163 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 CYB561D1Q8N8Q1 229 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 C19orf47Q8N9M1 422 aaKnown RBP4.46□□□□□ -1.7
PCDH9-203ENST00000456367 NPEPL1Q8NDH3 523 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 IFI44Q8TCB0 444 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ERGIC1Q969X5 290 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF799Q96GE5 643 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 FAAP24Q9BTP7 215 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 MAP1LC3CQ9BXW4 147 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 VN1R1Q9GZP7 353 aa4.46□□□□□ -1.7
PCDH9-203ENST00000456367 WNT5BQ9H1J7 359 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms