RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ATXN7L3Q14CW9 347 aaPredicted RBP13.06□□□□□ -0.32
LDLR-202ENST00000455727 ANKRD55Q3KP44 614 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 MOB3CQ70IA8 216 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 ARPC5LQ9BPX5 153 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 FAAP24Q9BTP7 215 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 DNTTIP1Q9H147 329 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 BCO1Q9HAY6 547 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 C14orf166Q9Y224 244 aaKnown RBP13.06□□□□□ -0.32
LDLR-202ENST00000455727 CSAG2Q9Y5P2 127 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 ZNF724A8MTY0 619 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 COX5BP10606 129 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 LUMP51884 338 aaPredicted RBP13.06□□□□□ -0.32
LDLR-202ENST00000455727 ARF1P84077 181 aaKnown RBP13.06□□□□□ -0.32
LDLR-202ENST00000455727 OSR2Q8N2R0 312 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
LDLR-202ENST00000455727 HES7Q9BYE0 225 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 AK3Q9UIJ7 227 aa13.06□□□□□ -0.32
LDLR-202ENST00000455727 IGKV1-12A0A0C4DH73 117 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 TEX13DA0A0J9YY54 714 aaPredicted RBP13.05□□□□□ -0.32
LDLR-202ENST00000455727 SCO1O75880 301 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 IGKV1D-12P01611 117 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 CTSDP07339 412 aaPredicted RBP13.05□□□□□ -0.32
LDLR-202ENST00000455727 RFC3P40938 356 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 SRYQ05066 204 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 DHRS11Q6UWP2 260 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 BVESQ8NE79 360 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 C2orf50Q96LR7 162 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 CMSS1Q9BQ75 279 aaKnown RBP13.05□□□□□ -0.32
LDLR-202ENST00000455727 ZNF587BE7ETH6 402 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 F8VVB4 439 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 F8VWA3 439 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 MSTNO14793 375 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 ADAP1O75689 374 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 IGHV3-9P01782 118 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 PMELP40967 661 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 MAGEA5P43359 124 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 BEX5Q5H9J7 111 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 PLCXD3Q63HM9 321 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 TMEM251Q8N6I4 163 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 ZNF2Q9BSG1 426 aaPredicted RBP13.05□□□□□ -0.32
LDLR-202ENST00000455727 HDHD3Q9BSH5 251 aaPredicted RBP13.05□□□□□ -0.32
LDLR-202ENST00000455727 FREM1Q5H8C1 2179 aa13.05□□□□□ -0.32
LDLR-202ENST00000455727 KNTC1P50748 2209 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 IFNA2P01563 188 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 PGAM2P15259 253 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 NUP62P37198 522 aaPredicted RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 PRSS12P56730 875 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 IL15RAQ13261 267 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 PAN3Q58A45 887 aaKnown RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 PRSS54Q6PEW0 395 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 RELL2Q8NC24 303 aaPredicted RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 Q8NFD4 153 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 PIGCQ92535 297 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 DCUN1D4Q92564 292 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 FER1L6-AS2Q96M78 137 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 ZNF75AQ96N20 296 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 SLC6A15Q9H2J7 730 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 METTL8Q9H825 291 aaKnown RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 NECAP2Q9NVZ3 263 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 F5H0A9 414 aaPredicted RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 GEMIN2O14893 280 aaKnown RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 PLATP00750 562 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 FCGR3AP08637 254 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 OR5H8P0DN80 308 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 NAAAQ02083 359 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 OR51F2Q8NH61 342 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 C1QTNF6Q9BXI9 259 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 C1orf123Q9NWV4 160 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 PLA2G3Q9NZ20 509 aa13.04□□□□□ -0.32
LDLR-202ENST00000455727 KLF13Q9Y2Y9 288 aaPredicted RBP13.04□□□□□ -0.32
LDLR-202ENST00000455727 FREM2Q5SZK8 3169 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 FAM166BA8MTA8 275 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 H0YIZ8 118 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 SP1P08047 785 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 PTGER4P35408 488 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 SNTB1Q13884 538 aaKnown RBP13.03□□□□□ -0.32
LDLR-202ENST00000455727 RNPS1Q15287 305 aaKnown RBP13.03□□□□□ -0.32
LDLR-202ENST00000455727 FBXL14Q8N1E6 418 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 PIK3IP1Q96FE7 263 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 OR10C1Q96KK4 312 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 CALHM2Q9HA72 323 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 BARX1Q9HBU1 254 aaPredicted RBP13.03□□□□□ -0.32
LDLR-202ENST00000455727 ST3GAL6Q9Y274 331 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
LDLR-202ENST00000455727 CRYM-AS1A6NIL9 109 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 NME2P1O60361 137 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 KNG1P01042 644 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 SFTPBP07988 381 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 PET100P0DJ07 73 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 NME2P22392 152 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 PLGLB1Q02325 96 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms