RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 OR14A2Q96R54 314 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 CCL13Q99616 98 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 CLN8Q9UBY8 286 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 ZNF879B4DU55 563 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 TRAPPC2LH3BP13 241 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 FCN3O75636 299 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 GPX5O75715 221 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 PLATP00750 562 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 HCKP08631 526 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 PSG2P11465 335 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 IGFBP3P17936 291 aaPredicted RBP23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 PCMT1P22061 227 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 MLLT11Q13015 90 aaPredicted RBP23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 PDZK1IP1Q13113 114 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 KISS1Q15726 138 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 ZNF788Q6ZQV5 615 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 SLC36A1Q7Z2H8 476 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 MKXQ8IYA7 352 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 MS4A15Q8N5U1 240 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 SLAMF9Q96A28 289 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 ORAI1Q96D31 301 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 CEP19Q96LK0 163 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 ACOT13Q9NPJ3 140 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 LRRC42Q9Y546 428 aa23.28■■□□□ 1.32
SMARCC1-203ENST00000454240 ZFHX3Q15911 3703 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 IGKV1D-17A0A075B6S4 117 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 NXPH2O95156 264 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 ALDOBP05062 364 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 HSMCR30P0CW71 290 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 POU3F4P49335 361 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 EMX1Q04741 257 aaPredicted RBP23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 CR1LQ2VPA4 569 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 SMIM21Q3B7S5 101 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 UFD1Q92890 307 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 RFT1Q96AA3 541 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 DERL3Q96Q80 235 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 MGLLQ99685 303 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 SMURF1Q9HCE7 757 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 MMP26Q9NRE1 261 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 ZNF222Q9UK12 451 aa23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 NIPBLQ6KC79 2804 aaeCLIP23.27■■□□□ 1.32
SMARCC1-203ENST00000454240 A0A1B0GW55 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 F8VVB4 439 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 F8VWA3 439 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L2P0CJ85 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L3P0CJ86 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L4P0CJ87 422 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L5P0CJ88 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L6P0CJ89 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L7P0CJ90 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 GATA3P23771 443 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 PAX2Q02962 417 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 FAM120AOSQ5T036 256 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 LIPKQ5VXJ0 399 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4L9Q6RFH8 374 aaPredicted RBP23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 UNQ9370/PRO34162Q6UXP9 181 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 BATF2Q8N1L9 274 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 THRSPQ92748 146 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 TMEM138Q9NPI0 162 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 DUX4Q9UBX2 424 aa23.26■■□□□ 1.31
SMARCC1-203ENST00000454240 A0A0G2JMP0 313 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 A0A0X1KG70 313 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 DVL1O14640 695 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 MAGEB3O15480 346 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 SPRY1O43609 319 aaPredicted RBP23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 CRLF1O75462 422 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 CYB5AP00167 134 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 TFF1P04155 84 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 CPEP16870 476 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 FSTP19883 344 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 ZP1P60852 638 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 PPP3R1P63098 170 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 DCAF12L2Q5VW00 463 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 ZNF367Q7RTV3 350 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 SPARTQ8N0X7 666 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 FAM216BQ8N7L0 139 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 OR4M2Q8NGB6 313 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 OR52N4Q8NGI2 321 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 DACT3Q96B18 629 aaPredicted RBP23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 GAFA1Q96PS6 74 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 TMED9Q9BVK6 235 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 OR5V1Q9UGF6 321 aa23.25■■□□□ 1.31
SMARCC1-203ENST00000454240 A0A1W2PPK0 400 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 RFPL4AA6NLU0 287 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 RFPL4AL1F8VTS6 287 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 PIN1P1O15428 100 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 INMTO95050 263 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 TGFBR2P37173 567 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 ACSM3Q53FZ2 586 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 FAHD2BQ6P2I3 314 aaPredicted RBP23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 Q8IYB0 196 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 SAXO1Q8IYX7 474 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 SVOPQ8N4V2 548 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 FAHD2AQ96GK7 314 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 MED30Q96HR3 178 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 CKLFQ9UBR5 152 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 CDC42EP3Q9UKI2 254 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 FOXJ3Q9UPW0 622 aa23.24■■□□□ 1.31
SMARCC1-203ENST00000454240 TRAV8-7A0A075B6U6 113 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 IGKV1-12A0A0C4DH73 117 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms