RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ZNF205O95201 554 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 UBBP0CG47 229 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 CALCBP10092 127 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 HTR2CP28335 458 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 S100A5P33763 92 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 GPR6P46095 362 aaPredicted RBP10.96□□□□□ -0.65
VPS33A-202ENST00000451053 HAAOP46952 286 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 MTCP1P56278 107 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 TMEM33P57088 247 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 KISS1Q15726 138 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 HES5Q5TA89 166 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 HAGHLQ6PII5 290 aaPredicted RBP10.96□□□□□ -0.65
VPS33A-202ENST00000451053 ANGPTL5Q86XS5 388 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 OR52N4Q8NGI2 321 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF671Q8TAW3 534 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 LRRC29Q8WV35 223 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 SPACA5Q96QH8 159 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 GFI1Q99684 422 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 C6orf62Q9GZU0 229 aaPredicted RBP10.96□□□□□ -0.65
VPS33A-202ENST00000451053 SMURF1Q9HCE7 757 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 RNF7Q9UBF6 113 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 PEX16Q9Y5Y5 336 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 ETV7Q9Y603 341 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 NOTCH2Q04721 2471 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 LRRC30A6NM36 301 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 IFNL4K9M1U5 179 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 WNT9BO14905 357 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 SYNGR1O43759 233 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 PLATP00750 562 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 EGR1P18146 543 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 CD80P33681 288 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 NR4A2P43354 598 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 CRIP3Q6Q6R5 217 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 ZNF573Q86YE8 665 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 CALHM1Q8IU99 346 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 GCSAMQ8N6F7 178 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 BOLLQ8N9W6 283 aaKnown RBP10.95□□□□□ -0.66
VPS33A-202ENST00000451053 C19orf18Q8NEA5 215 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 AQP3Q92482 292 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 HPS1Q92902 700 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 RFT1Q96AA3 541 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 S100A13Q99584 98 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 NKX3-1Q99801 234 aaPredicted RBP10.95□□□□□ -0.66
VPS33A-202ENST00000451053 GHRLQ9UBU3 117 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 ADAM30Q9UKF2 790 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 NPTNQ9Y639 398 aa10.95□□□□□ -0.66
VPS33A-202ENST00000451053 A0A096LNT2 108 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 J3QT63 122 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 BPNT1O95861 308 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 LHBP01229 141 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 IGHV2-70P01814 119 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 SLC2A2P11168 524 aaPredicted RBP10.94□□□□□ -0.66
VPS33A-202ENST00000451053 IRF2P14316 349 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 SLC25A16P16260 332 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 MPZP25189 248 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 ZMYND11Q15326 602 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 AWAT2Q6E213 333 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 FAM166AQ6J272 317 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 LYPD6Q86Y78 171 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 RAB1CQ92928 201 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 TIMD4Q96H15 378 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 ZNF488Q96MN9 340 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 CMTM3Q96MX0 182 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 NARFLQ9H6Q4 476 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 CNTD2Q9H8S5 307 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 LIN7BQ9HAP6 207 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 SPATA2Q9UM82 520 aa10.94□□□□□ -0.66
VPS33A-202ENST00000451053 MRPS28Q9Y2Q9 187 aaKnown RBP10.94□□□□□ -0.66
VPS33A-202ENST00000451053 CSMD1Q96PZ7 3565 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 IGHV4-61A0A0C4DH41 118 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 ISPDA4D126 451 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 SRRM5B3KS81 715 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.93□□□□□ -0.66
VPS33A-202ENST00000451053 RGS5O15539 181 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 AKR7A2O43488 359 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 ZNF780AO75290 641 aaPredicted RBP10.93□□□□□ -0.66
VPS33A-202ENST00000451053 CYB5AP00167 134 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 ARSBP15848 533 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 CFHR2P36980 270 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 PTGFRP43088 359 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 POU3F4P49335 361 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 GMFBP60983 142 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 BTG1P62324 171 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 FAM189A2Q15884 450 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 SLC25A26Q70HW3 274 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 PEG10Q86TG7 708 aaKnown RBP10.93□□□□□ -0.66
VPS33A-202ENST00000451053 BATF2Q8N1L9 274 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
VPS33A-202ENST00000451053 ZSCAN4Q8NAM6 433 aaPredicted RBP10.93□□□□□ -0.66
VPS33A-202ENST00000451053 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 OR5D18Q8NGL1 313 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 OR10Z1Q8NGY1 313 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 TBC1D15Q8TC07 691 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms