RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CA11O75493 328 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 MPZP25189 248 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 GCH1P30793 250 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 NPBWR2P48146 333 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 RAG2P55895 527 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 TAF9Q16594 264 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 FAAP20Q6NZ36 180 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 C22orf34Q6ZV56 151 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 OR8G5Q8NG78 346 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
USP39-207ENST00000450066 PKIBQ9C010 78 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 HSF4Q9ULV5 492 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ST3GAL6Q9Y274 331 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 KALRNO60229 2985 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 CD74P04233 296 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 RBM11P57052 281 aaKnown RBP12.17□□□□□ -0.46
USP39-207ENST00000450066 IL24Q13007 206 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 CARTPTQ16568 116 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 PIGYQ3MUY2 71 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 HAGHLQ6PII5 290 aaPredicted RBP12.17□□□□□ -0.46
USP39-207ENST00000450066 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 OR4D10Q8NGI6 311 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 SLAMF9Q96A28 289 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 TMEM100Q9NV29 134 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 PLEKHJ1Q9NW61 149 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 MTCH1Q9NZJ7 389 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 ANAPC10Q9UM13 185 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 SHANK1Q9Y566 2161 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 TRAPPC2LH3BP13 241 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 GEMIN2O14893 280 aaKnown RBP12.17□□□□□ -0.46
USP39-207ENST00000450066 FCER2P06734 321 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 CBX5P45973 191 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 FABP6P51161 128 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 NHLRC3Q5JS37 347 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 GVQW1Q8N7I0 195 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 OR56B4Q8NH76 319 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 OSGIN2Q9Y236 505 aa12.17□□□□□ -0.46
USP39-207ENST00000450066 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A10PA6NDY2 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A18PA6NE21 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A16PA6NEW6 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A20PA6NIJ5 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A8PA6NJQ4 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A12PA8MX19 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A5PA8MXJ8 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 TIMM8AO60220 97 aaPredicted RBP12.16□□□□□ -0.46
USP39-207ENST00000450066 RAB3DO95716 219 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 DHFRP00374 187 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A15PP0C7V4 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A13PP0C7W8 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A14PP0C7W9 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FAM90A24PP0C7X0 464 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 NAT1P18440 290 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 BCL3P20749 454 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 HLA-DMAP28067 261 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 FGF12P61328 243 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 NKX6-1P78426 367 aaPredicted RBP12.16□□□□□ -0.46
USP39-207ENST00000450066 ARFRP1Q13795 201 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 OR8G1Q15617 311 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 RGS7BPQ6MZT1 257 aaPredicted RBP12.16□□□□□ -0.46
USP39-207ENST00000450066 ZNF782Q6ZMW2 699 aaPredicted RBP12.16□□□□□ -0.46
USP39-207ENST00000450066 C6orf201Q7Z4U5 140 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 C20orf85Q9H1P6 137 aa12.16□□□□□ -0.46
USP39-207ENST00000450066 J3QT63 122 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 CCL21O00585 134 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 SYNGR1O43759 233 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 NDUFB6O95139 128 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 ZNF250P15622 560 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 TBPP20226 339 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 CD40P25942 277 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 CHATP28329 748 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 GLRXP35754 106 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 RAB25P57735 213 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 MEF2DQ14814 521 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 NKAPLQ5M9Q1 402 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 PCSK4Q6UW60 755 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 OR4S1Q8NGB4 309 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 RHOFQ9HBH0 211 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 ALG5Q9Y673 324 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.15□□□□□ -0.46
USP39-207ENST00000450066 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 TMEM210A6NLX4 147 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 F8VVB4 439 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 F8VWA3 439 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 PPP3CBP16298 524 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 WDR86Q86TI4 376 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
USP39-207ENST00000450066 FBXW5Q969U6 566 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms