RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 A3GALT2U3KPV4 340 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 TANC2Q9HCD6 1990 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 F8VVB4 439 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 F8VWA3 439 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 CDC14BO60729 498 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 RANBP1P43487 201 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 GATA4P43694 442 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 CAPZA1P52907 286 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
TNF-208ENST00000449264 MADCAM1Q13477 382 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 UBE2NLQ5JXB2 153 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 BOLLQ8N9W6 283 aaKnown RBP12.36□□□□□ -0.43
TNF-208ENST00000449264 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 SLC25A38Q96DW6 304 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 CEP19Q96LK0 163 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 RAB1BQ9H0U4 201 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 RHBDL2Q9NX52 303 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 FBXO9Q9UK97 447 aaPredicted RBP12.36□□□□□ -0.43
TNF-208ENST00000449264 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
TNF-208ENST00000449264 FAM25AB3EWG3 89 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 FAM25CB3EWG5 89 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 FAM25GB3EWG6 89 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
TNF-208ENST00000449264 KDM4BO94953 1096 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 HPXP02790 462 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 EIF4EP06730 217 aaKnown RBP12.35□□□□□ -0.43
TNF-208ENST00000449264 MGMTP16455 207 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 SCAND1P57086 179 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 QRFPP83859 136 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 DYNC1I2Q13409 638 aaKnown RBP12.35□□□□□ -0.43
TNF-208ENST00000449264 METAP1DQ6UB28 335 aaPredicted RBP12.35□□□□□ -0.43
TNF-208ENST00000449264 ASCL4Q6XD76 172 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 OR2W3Q7Z3T1 314 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 TGIF2LYQ8IUE0 185 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 SAXO1Q8IYX7 474 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 EMG1Q92979 244 aaKnown RBP12.35□□□□□ -0.43
TNF-208ENST00000449264 C14orf79Q96F83 325 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 CCL19Q99731 98 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 PEX16Q9Y5Y5 336 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 FBN2P35556 2912 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 TMEM14DPA8MWL7 114 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 LDLRAD4O15165 306 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 NXPH2O95156 264 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 PRKACAP17612 351 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 ELK1P19419 428 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 PMELP40967 661 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 ART1P52961 327 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 GPR176Q14439 515 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 ZNF787Q6DD87 383 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 DTX3Q8N9I9 347 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 OR6Q1Q8NGQ2 317 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 OR11L1Q8NGX0 322 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 NRGNQ92686 78 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 SELENOIQ9C0D9 397 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 ATG5Q9H1Y0 275 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 IL36GQ9NZH8 169 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 ADAM30Q9UKF2 790 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
TNF-208ENST00000449264 POLQO75417 2590 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 WNT9BO14905 357 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 LY6HO94772 140 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
TNF-208ENST00000449264 GTF2F2P13984 249 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 IRF2P14316 349 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 GLRA1P23415 457 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 PIGYQ3MUY2 71 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 CMTM4Q8IZR5 234 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 OSR2Q8N2R0 312 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 POC1AQ8NBT0 407 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 NRIP2Q9BQI9 281 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 NICN1Q9BSH3 213 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 WDR13Q9H1Z4 485 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 DCAF16Q9NXF7 216 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 RAB22AQ9UL26 194 aa12.34□□□□□ -0.43
TNF-208ENST00000449264 IGHV1-69-2A0A0G2JMI3 117 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 LRRC30A6NM36 301 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 H7C417 338 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 APOA1P02647 267 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 EGR1P18146 543 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 RAB6AP20340 208 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 SSTR2P30874 369 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 CNIH2Q6PI25 160 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
TNF-208ENST00000449264 Q8IYB0 196 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 FAM58AQ8N1B3 248 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 OR51T1Q8NGJ9 327 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 CCL17Q92583 94 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 LIME1Q9H400 295 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 PCDHB16Q9NRJ7 776 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms