RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 MTFP1Q9UDX5 166 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 A0A0A6YYJ9 748 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 A0A0G2JMM0 328 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 A0A1W2PPB8 328 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 A0A1W2PRS3 328 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 KIR3DP1A8MWS1 328 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 PNPP00491 289 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 CTSSP25774 331 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 KIR3DL2P43630 455 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 RPS27AP62979 156 aaKnown RBP6.49□□□□□ -1.37
SYNE1-213ENST00000448038 UBA52P62987 128 aaKnown RBP6.49□□□□□ -1.37
SYNE1-213ENST00000448038 AKR1C1Q04828 323 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 CLINT1Q14677 625 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 OPCMLQ14982 345 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 FAM210AQ96ND0 272 aa6.49□□□□□ -1.37
SYNE1-213ENST00000448038 ST8SIA3O43173 380 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 PPP3CBP16298 524 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 AADACP22760 399 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 SERPINF1P36955 418 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 BLOC1S1P78537 153 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 HNF4GQ14541 408 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 RIPPLY2Q5TAB7 128 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ATPAF1Q5TC12 328 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 RFESDQ8TAC1 157 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 CHST5Q9GZS9 411 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 RALGAPA1Q6GYQ0 2036 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF724A8MTY0 619 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ATXN7O15265 892 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 TNFSF10P50591 281 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 AKR1D1P51857 326 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 COL19A1Q14993 1142 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 C9orf152Q5JTZ5 239 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 NCCRP1Q6ZVX7 275 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 MOB1BQ7L9L4 216 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 OR10V1Q8NGI7 309 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 OR8U1Q8NH10 309 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 MS4A3Q96HJ5 214 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 MSL2Q9HCI7 577 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 DLL4Q9NR61 685 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 MRPL22Q9NWU5 206 aaKnown RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 TREM2Q9NZC2 230 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 DNAJC13O75165 2243 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 SHOXO15266 292 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ZIC3O60481 467 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 APOC3P02656 99 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 SNRPNP63162 240 aaKnown RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 S100PBPQ96BU1 408 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ABHD17AQ96GS6 310 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ARPC5LQ9BPX5 153 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 STARD10Q9Y365 291 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 A0A1B0GUH1 482 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 DEFA4P12838 97 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 RPS4XP62701 263 aaKnown RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 LRRTM1Q86UE6 522 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 MOGAT3Q86VF5 341 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 COMMD7Q86VX2 200 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ABHD1Q96SE0 405 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 DDOQ99489 341 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 SAP30LQ9HAJ7 183 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 GCM1Q9NP62 436 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ZNHIT1O43257 154 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 FAM87AP0C7U9 286 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ZBTB25P24278 435 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 MDH2P40926 338 aaKnown RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 SUCLG1P53597 346 aaKnown RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 RPS16P62249 146 aaKnown RBP6.48□□□□□ -1.37
SYNE1-213ENST00000448038 BAXQ07812 192 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 NAA40Q86UY6 237 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 OR5A2Q8NGI9 324 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 LHFPL6Q9Y693 200 aa6.48□□□□□ -1.37
SYNE1-213ENST00000448038 ARPC4-TTLL3A0A0A6YYG9 625 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 PYCARD-AS1I3L0S3 204 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 ADAM20O43506 726 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 RAMP1O60894 148 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 GIPP09681 153 aaPredicted RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 ROM1Q03395 351 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 KLRB1Q12918 225 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TEX30Q5JUR7 227 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SSX8Q7RTT4 187 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 LYG2Q86SG7 212 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SLC38A6Q8IZM9 456 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR5D13Q8NGL4 314 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 POC1BQ8TC44 478 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 FBLIM1Q8WUP2 373 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 GON7Q9BXV9 100 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SHARPINQ9H0F6 387 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OCEL1Q9H607 264 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 UBTD1Q9HAC8 227 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TTC28Q96AY4 2481 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 A0A0U1RQV5 110 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 BTBD17A6NE02 478 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SNRPGP15A8MWD9 76 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 J3QT63 122 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TRAPPC2P0DI81 140 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TRAPPC2BP0DI82 140 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 BCL3P20749 454 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 KITLGP21583 273 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 RHEBQ15382 184 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR8G2PQ6IF36 304 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 ALKAL2Q6UX46 152 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms