RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 UBE2V2Q15819 145 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 RHBDD2Q6NTF9 364 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 OR4A4PQ8NGN8 299 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 GPHA2Q96T91 129 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 USB1Q9BQ65 265 aaKnown RBP10.42□□□□□ -0.74
MSH6-204ENST00000445503 CRLF2Q9HC73 371 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 DNAJB11Q9UBS4 358 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 NSG1A0A0A6YYJ2 146 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 H3BP45 60 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 HSD17B6O14756 317 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 SSSCA1O60232 199 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 NRASP01111 189 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 PTAFRP25105 342 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 GSK3AP49840 483 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 CFHR1Q03591 330 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 FABP9Q0Z7S8 132 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 CDCP2Q5VXM1 449 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 RTL6Q6ICC9 239 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 SLC25A26Q70HW3 274 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 PP6455Q8WZ26 134 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 SAT2Q96F10 170 aaPredicted RBP10.42□□□□□ -0.74
MSH6-204ENST00000445503 SGCZQ96LD1 299 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 RTBDNQ9BSG5 229 aaPredicted RBP10.42□□□□□ -0.74
MSH6-204ENST00000445503 NELFAQ9H3P2 528 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 ANXA10Q9UJ72 324 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 HDGFL3Q9Y3E1 203 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 TRAF3IP2O43734 574 aaPredicted RBP10.41□□□□□ -0.74
MSH6-204ENST00000445503 EFNA2O43921 213 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 CXCL13O43927 109 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 ADCYAP1P18509 176 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 UBE2KP61086 200 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 NAAAQ02083 359 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 TCEAL6Q6IPX3 200 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 OR11L1Q8NGX0 322 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 BCO1Q9HAY6 547 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 AK3Q9UIJ7 227 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 C7orf77A4D0Y5 90 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 GEMIN2O14893 280 aaKnown RBP10.41□□□□□ -0.74
MSH6-204ENST00000445503 HKR1P10072 659 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 CD79AP11912 226 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
MSH6-204ENST00000445503 NDUFA6P56556 154 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 CARD18P57730 90 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 SLC25A45Q8N413 288 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 KCNS2Q9ULS6 477 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 MFNGO00587 321 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 IFNA17P01571 189 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 IGHMP01871 453 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 TK1P04183 234 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 CXCL12P48061 93 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 SSR4P51571 173 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 NHLH2Q02577 135 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 GPR157Q5UAW9 335 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 DHRS11Q6UWP2 260 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 RPS19BP1Q86WX3 136 aaKnown RBP10.41□□□□□ -0.74
MSH6-204ENST00000445503 MCEMP1Q8IX19 187 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 SMRP1Q8NCR6 262 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 OR14K1Q8NGZ2 314 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 GLYATL2Q8WU03 294 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 CCDC74BQ96LY2 380 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 PLEKHA2Q9HB19 425 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 C19orf12Q9NSK7 152 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 RCC2Q9P258 522 aaKnown RBP10.41□□□□□ -0.74
MSH6-204ENST00000445503 MCTS1Q9ULC4 181 aaKnown RBP10.41□□□□□ -0.74
MSH6-204ENST00000445503 MYO7BQ6PIF6 2116 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 SVILO95425 2214 aa10.41□□□□□ -0.74
MSH6-204ENST00000445503 TICRRQ7Z2Z1 1910 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 IGKV1-9A0A0C4DH69 117 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 LOC390937A0A1W2PQ73 354 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 CDRT15L2A8MXV6 281 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 EIF1BO60739 113 aaKnown RBP10.4□□□□□ -0.74
MSH6-204ENST00000445503 SRFP11831 508 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 NKX2-1P43699 371 aaPredicted RBP10.4□□□□□ -0.74
MSH6-204ENST00000445503 OR2M3Q8NG83 312 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 S100PBPQ96BU1 408 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 GHRLQ9UBU3 117 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 A0A096LPE4 126 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 A0A1W2PPE2 198 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 A0A1W2PPZ6 126 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 A0A1W2PR77 199 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 OR2C1O95371 312 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 ZNF708P17019 499 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 TAGLN2P37802 199 aaKnown RBP10.4□□□□□ -0.74
MSH6-204ENST00000445503 OR51H1Q8NH63 302 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 ERGIC1Q969X5 290 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 UCK1Q9HA47 277 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 B3GAT1Q9P2W7 334 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 IGKV1D-8A0A087WSZ0 117 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 TRAV20A0A0B4J274 112 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 GDF9O60383 454 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 LTBRP36941 435 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 KIAA0141Q14154 515 aaPredicted RBP10.4□□□□□ -0.74
MSH6-204ENST00000445503 LPAL2Q16609 132 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 ZNF574Q6ZN55 896 aaPredicted RBP10.4□□□□□ -0.74
MSH6-204ENST00000445503 POC1AQ8NBT0 407 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 SCGB1C1Q8TD33 95 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 MRGPRFQ96AM1 343 aa10.4□□□□□ -0.74
MSH6-204ENST00000445503 BARX1Q9HBU1 254 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms