RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SCN9AQ15858 1988 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 LOXHD1Q8IVV2 1947 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 A0A1W2PRS3 328 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CDC14CA4D256 554 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CLEC18AA5D8T8 446 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 C17orf105B2RV13 164 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 EOMESO95936 686 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 IQCF3P0C7M6 154 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H1DP16402 221 aaKnown RBP4.6□□□□□ -1.67
SCN11A-202ENST00000444237 GLRA1P23415 457 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 ATP6V0CP27449 155 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 HTR1DP28221 377 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 RND3P61587 244 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 EWSR1Q01844 656 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCN11A-202ENST00000444237 EOGTQ5NDL2 527 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 FAM219BQ5XKK7 198 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SCD5Q86SK9 330 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 MYPOPQ86VE0 399 aaPredicted RBP4.6□□□□□ -1.67
SCN11A-202ENST00000444237 ARL14EPQ8N8R7 260 aaPredicted RBP4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CLEC18CQ8NCF0 446 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 DIO2Q92813 273 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 OR2A5Q96R48 311 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CITED1Q99966 193 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 LINC00597Q9H2U6 94 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 NTNG1Q9Y2I2 539 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 OR51B4Q9Y5P0 310 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 QSER1Q2KHR3 1735 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 A0A1W2PPE3 182 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SNURFLB1AK76 121 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 F8VVB4 439 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 F8VWA3 439 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 ALOX12BO75342 701 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 NXPH3O95157 252 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 APBB3O95704 486 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CA2P00918 260 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SOD2P04179 222 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 NPSP0C0P6 89 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CPMP14384 443 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 MDH2P40926 338 aaKnown RBP4.6□□□□□ -1.67
SCN11A-202ENST00000444237 OR1D4P47884 311 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SLC37A1P57057 533 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SELENOVP59797 346 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 BTG2P78543 158 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 TTC32Q5I0X7 151 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 ZNF506Q5JVG8 444 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 ZNF664Q8N3J9 261 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 DDIT4LQ96D03 193 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 MUCL1Q96DR8 90 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 SLC6A18Q96N87 628 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 VN1R3Q9BXE9 311 aa4.6□□□□□ -1.67
SCN11A-202ENST00000444237 CISD1Q9NZ45 108 aaKnown RBP4.6□□□□□ -1.67
SCN11A-202ENST00000444237 DOCK1Q14185 1865 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 CD5P06127 495 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 FAM157BP0CG42 384 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H1EP10412 219 aaKnown RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 FUT3P21217 361 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 RGRP47804 291 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 CKS1BP61024 79 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SELENOTP62341 195 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 WDR25Q64LD2 544 aaPredicted RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 DOK3Q7L591 496 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 LSRQ86X29 649 aaPredicted RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 APCDD1LQ8NCL9 501 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 ARRDC3Q96B67 414 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 MYEOVQ96EZ4 313 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 IGSF21Q96ID5 467 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 BOD1Q96IK1 185 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 FAM206AQ9NX38 181 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 HCRTR1O43613 425 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 IGHV2-5P01817 119 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 AMBPP02760 352 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 UMODP07911 640 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 HOXA11P31270 313 aaPredicted RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 GPR12P47775 334 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 ASCL1P50553 236 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SLC25A1P53007 311 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 TAS2R45P59539 299 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 OLIG3Q7RTU3 272 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 MORN4Q8NDC4 146 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 MRPL30Q8TCC3 161 aaKnown RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 TMEM170AQ8WVE7 144 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 C4orf45Q96LM5 186 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 FAM173AQ9BQD7 235 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 NUDT22Q9BRQ3 303 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SNHG12Q9BXW3 62 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 PECRQ9BY49 303 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 UBTD1Q9HAC8 227 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 ADAMTS5Q9UNA0 930 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 TRAV14DV4A0A0A6YYC5 116 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 TRBV9A0A0B4J1U6 114 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 VSTM2BA6NLU5 285 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 FFAR1O14842 300 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 B4GALT2O60909 372 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 LEFTY1O75610 366 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 STC2O76061 302 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SLCO2B1O94956 709 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 MMP9P14780 707 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 KIR3DL2P43630 455 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms