RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 NDUFA2O43678 99 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 SNAP91O60641 907 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 NOS1APO75052 506 aaPredicted RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 AIFM1O95831 613 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 SLC25A27O95847 323 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 P01737 135 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 RBMY1DP0C7P1 496 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 LINC00614P0C842 121 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 RBMY1A1P0DJD3 496 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 PGA4P0DJD7 388 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 PGA3P0DJD8 388 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 SCGB1A1P11684 91 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 AKR1C4P17516 323 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 ATF1P18846 271 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 PFN2P35080 140 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 TAS2R41P59536 307 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 RPL32P62910 135 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 GINS1Q14691 196 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 LRRC75BQ2VPJ9 315 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 C14orf28Q4W4Y0 310 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 Q6ZVH6 145 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 CLVS1Q8IUQ0 354 aaPredicted RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 ZNF491Q8N8L2 437 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 OR11H1Q8NG94 326 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 OR4C13Q8NGP0 309 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 OR11H2Q8NH07 326 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 RNASE11Q8TAA1 199 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 PIFOQ8TCI5 191 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 Q8WTZ3 238 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 SDR42E1Q8WUS8 393 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 ASB17Q8WXJ9 295 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 ASB13Q8WXK3 278 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 FGF14Q92915 247 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 SIGMAR1Q99720 223 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 TMED9Q9BVK6 235 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 OR11A1Q9GZK7 315 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 NMNAT1Q9HAN9 279 aaPredicted RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 TREM2Q9NZC2 230 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 ZNF225Q9UK10 706 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 ZNF256Q9Y2P7 627 aaPredicted RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS50-206ENST00000443443 PCF11O94913 1555 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 RIMS2Q9UQ26 1411 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 IGHV3-20A0A0C4DH32 117 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 A0A0G2JMP0 313 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 TEX48A0A1B0GUV7 120 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 OR6C6A6NF89 314 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 G3V2L1 256 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 K7EQD1 137 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 MFNGO00587 321 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 VENTXO95231 258 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 HAND1O96004 215 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 IFNA1P01562 189 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 RCC1P18754 421 aaPredicted RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 WARSP23381 471 aaKnown RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 RCVRNP35243 200 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 OR1D4P47884 311 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 APOC4P55056 127 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 CDKN2DP55273 166 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 MXD1Q05195 221 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 FMODQ06828 376 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 SMAGPQ0VAQ4 97 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 ZNF266Q14584 549 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 OR1Q1Q15612 314 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 PYCR3Q53H96 274 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 TFDP3Q5H9I0 405 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 KLF17Q5JT82 389 aaPredicted RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 PAGE3Q5JUK9 113 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 CYHR1Q6ZMK1 362 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 PPP1R27Q86WC6 154 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 GAPTQ8N292 157 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 CHST4Q8NCG5 386 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 OR4M2Q8NGB6 313 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 OR6T1Q8NGN1 323 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 CYGBQ8WWM9 190 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 RDH5Q92781 318 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 UCN3Q969E3 161 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 CPNE2Q96FN4 548 aaPredicted RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 HIST1H4GQ99525 98 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 PITX2Q99697 317 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 CMSS1Q9BQ75 279 aaKnown RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 SULT4A1Q9BR01 284 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 KIFC1Q9BW19 673 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 SRXN1Q9BYN0 137 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 RPF2Q9H7B2 306 aaKnown RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 METTL17Q9H7H0 456 aaPredicted RBP3.54□□□□□ -1.84
VPS50-206ENST00000443443 MOB1AQ9H8S9 216 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 BIN3Q9NQY0 253 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 RBM22Q9NW64 420 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS50-206ENST00000443443 ZNF446Q9NWS9 450 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 DDIT4Q9NX09 232 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 VPREB3Q9UKI3 123 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 VSIG4Q9Y279 399 aa3.54□□□□□ -1.84
VPS50-206ENST00000443443 NUP160Q12769 1436 aa3.53□□□□□ -1.84
VPS50-206ENST00000443443 CAMSAP1Q5T5Y3 1602 aa3.53□□□□□ -1.84
VPS50-206ENST00000443443 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms