RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 GGNBP1Q5YKI7 109 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 GLYATL2Q8WU03 294 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF251Q9BRH9 671 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 FAAP24Q9BTP7 215 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 KCNIP3Q9Y2W7 256 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 ANGPTL7O43827 346 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 GAPDHP04406 335 aaKnown RBP14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 F2RL1P55085 397 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 MRPS34P82930 218 aaKnown RBP14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 TMEM268Q5VZI3 342 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 CMSS1Q9BQ75 279 aaKnown RBP14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 PARP11Q9NR21 331 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 FBXL17Q9UF56 701 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 LSM5Q9Y4Y9 91 aaKnown RBP14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 IGHV1-45A0A0A0MS14 117 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF850A8MQ14 1090 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 ZIC3O60481 467 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 SMIM6P0DI80 62 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 ACKR3P25106 362 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 PIGPP57054 158 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 TMEM33P57088 247 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 OR2AE1Q8NHA4 323 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 MRPL24Q96A35 216 aaKnown RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF837Q96EG3 531 aaPredicted RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 NECAP2Q9NVZ3 263 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 HSF4Q9ULV5 492 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 PI4KAP42356 2102 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 FAM230AA0A1W2PPH8 454 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 G3V3Y1 287 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 SPRY1O43609 319 aaPredicted RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 GATCO43716 136 aaKnown RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 SFTA3P0C7M3 94 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 SPP1P10451 314 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 SUCLG1P53597 346 aaKnown RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 RRADP55042 308 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 CNN3Q15417 329 aaKnown RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 EXT1Q16394 746 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 TMEM156Q8N614 296 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 ZIC4Q8N9L1 334 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 TCEAL3Q969E4 200 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF775Q96BV0 537 aaPredicted RBP14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 REEP6Q96HR9 211 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 WNT16Q9UBV4 365 aa14.38□□□□□ -0.11
SEMA3B-207ENST00000441915 K7ESF4 209 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 TNFSF11O14788 317 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 AGPAT2O15120 278 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 NDUFS6O75380 124 aaKnown RBP14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 SCGB1D2O95969 90 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF806P0C7X5 589 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 FGF5P12034 268 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 SSR4P51571 173 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 FAM76BQ5HYJ3 339 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 SAP25Q8TEE9 199 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 C2CD4CQ8TF44 421 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 TOMM40LQ969M1 308 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 AK3Q9UIJ7 227 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 A0A0J9YW62 118 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 GDF9O60383 454 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 S100A9P06702 114 aaKnown RBP14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 HEXAP06865 529 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 KLK3P07288 261 aaPredicted RBP14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 FCGR3AP08637 254 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 CRYGSP22914 178 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 CD80P33681 288 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 OPRM1P35372 400 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 RAC1P63000 192 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 PDZK1IP1Q13113 114 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 RAB35Q15286 201 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 ABCA11PQ4W5N1 156 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 BTNL8Q6UX41 500 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 Q6ZRG5 221 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 SLC16A13Q7RTY0 426 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 C20orf196Q8IYI0 205 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 DMBX1Q8NFW5 382 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 IMMP1LQ96LU5 166 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 PLEKHA2Q9HB19 425 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 PROK2Q9HC23 129 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 PTRH2Q9Y3E5 179 aaKnown RBP14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 SDK2Q58EX2 2172 aa14.37□□□□□ -0.11
SEMA3B-207ENST00000441915 CD5P06127 495 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 DTYMKP23919 212 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 RBP2P50120 134 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 LYSMD4Q5XG99 296 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 DHRS11Q6UWP2 260 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 NAT6Q93015 286 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 BORCS8Q96FH0 119 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 SULT4A1Q9BR01 284 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 SMIM3Q9BZL3 60 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 AMDHD2Q9Y303 409 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 POMT1Q9Y6A1 747 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF728P0DKX0 622 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 COX6A1P12074 109 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 NFYBP25208 207 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 FAM3AP98173 230 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 IL11RAQ14626 422 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 LIME1Q9H400 295 aa14.36□□□□□ -0.11
SEMA3B-207ENST00000441915 GJE1A6NN92 205 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 MSTNO14793 375 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 CBR3O75828 277 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 LCATP04180 440 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms