RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ANGPTL5Q86XS5 388 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 ZZEF1O43149 2961 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 KMT2EQ8IZD2 1858 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 NUDT19A8MXV4 375 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 E9PLN8 166 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 SYNGR4O95473 234 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 SP1P08047 785 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 MUC1P15941 1255 aaPredicted RBP12.36□□□□□ -0.43
LIMD1-202ENST00000440097 IL13RA1P78552 427 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 MOGAT2Q3SYC2 334 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 FAM27BQ5VT28 67 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 MITD1Q8WV92 249 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 PHB2Q99623 299 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 HRH4Q9H3N8 390 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 RCC2Q9P258 522 aaKnown RBP12.36□□□□□ -0.43
LIMD1-202ENST00000440097 KLF13Q9Y2Y9 288 aaPredicted RBP12.36□□□□□ -0.43
LIMD1-202ENST00000440097 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 KLRC4-KLRK1H3BQV0 150 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 S100A8P05109 93 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CD46P15529 392 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CXADRP78310 365 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 TCF15Q12870 199 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 C3AR1Q16581 482 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 AKIRIN2Q53H80 203 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 ABLIM2Q6H8Q1 611 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 MRGPRFQ96AM1 343 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 FOXB1Q99853 325 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CALHM2Q9HA72 323 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CYTL1Q9NRR1 136 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 TMEM38BQ9NVV0 291 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 IGF2RP11717 2491 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 TEX13DA0A0J9YY54 714 aaPredicted RBP12.35□□□□□ -0.43
LIMD1-202ENST00000440097 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 TMEM235A6NFC5 223 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CYTIPO60759 359 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 VAMP1P23763 118 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 PSMB6P28072 239 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 LHX2P50458 406 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CDNFQ49AH0 187 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 IL34Q6ZMJ4 242 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 TMPRSS7Q7RTY8 843 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
LIMD1-202ENST00000440097 OR5D18Q8NGL1 313 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 AKR7LQ8NHP1 331 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 FNDC9Q8TBE3 224 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 RRNAD1Q96FB5 475 aaKnown RBP12.35□□□□□ -0.43
LIMD1-202ENST00000440097 APC2O95996 2303 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 C5orf52A6NGY3 159 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 IL2RAP01589 272 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 HPNP05981 417 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CRHP06850 196 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 FOLR2P14207 255 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 PTAFRP25105 342 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF584Q8IVC4 421 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 CMBLQ96DG6 245 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 BCL2L14Q9BZR8 327 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 DEFB127Q9H1M4 99 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 RNF122Q9H9V4 155 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
LIMD1-202ENST00000440097 MCTS1Q9ULC4 181 aaKnown RBP12.35□□□□□ -0.43
LIMD1-202ENST00000440097 NKX2-8O15522 239 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 FAHP16930 419 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF32P17041 273 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 HTR5AP47898 357 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 PPT1P50897 306 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 SRSF6Q13247 344 aaKnown RBP12.34□□□□□ -0.43
LIMD1-202ENST00000440097 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 ADAD2Q8NCV1 583 aaKnown RBP12.34□□□□□ -0.43
LIMD1-202ENST00000440097 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 CPT1CQ8TCG5 803 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 RAB22AQ9UL26 194 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 C1orf196B1AJZ1 125 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 UBE2CO00762 179 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 SSX5O60225 188 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 LCATP04180 440 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 S100A6P06703 90 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 AKR1C4P17516 323 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 CCL11P51671 97 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 PRSS12P56730 875 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 EIF2S3LQ2VIR3 472 aaKnown RBP12.34□□□□□ -0.43
LIMD1-202ENST00000440097 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
LIMD1-202ENST00000440097 GLIPR1L1Q6UWM5 242 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 TMEM200AQ86VY9 491 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 OR2AE1Q8NHA4 323 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 CYYR1Q96J86 154 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 PRRT1Q99946 306 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 LRFN3Q9BTN0 628 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms