RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SLC25A26Q70HW3 274 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PEG10Q86TG7 708 aaKnown RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 CNEP1R1Q8N9A8 125 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OR5AP2Q8NGF4 316 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 MBD3L2Q8NHZ7 208 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 GRPEL2Q8TAA5 225 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 SCGB3A2Q96PL1 93 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 ST6GALNAC5Q9BVH7 336 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 TMPRSS13Q9BYE2 586 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 FN3KRPQ9HA64 309 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OPN4Q9UHM6 478 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OSGIN2Q9Y236 505 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 ST3GAL6Q9Y274 331 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OR5B21A6NL26 309 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PRSS44E7EML9 344 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 F5H5P2 479 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 GEMIN2O14893 280 aaKnown RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PDCD6O75340 191 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 LYZL6O75951 148 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 SNAPC5O75971 98 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 SLC22A5O76082 557 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 HLA-AP01891 365 aaKnown RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PDGFAP04085 211 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 TPOP07202 933 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF35P13682 527 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 FPR2P25090 351 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 H2BFSP57053 126 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PPP1R1AQ13522 171 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PIGYQ3MUY2 71 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 CHRFAM7AQ494W8 412 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 NHLRC3Q5JS37 347 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 LPCAT3Q6P1A2 487 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 FBXW12Q6X9E4 464 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OVCH2Q7RTZ1 564 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 RBMXL3Q8N7X1 1067 aaKnown RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OR10AD1Q8NGE0 317 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 MARCH1Q8TCQ1 289 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 OR5P3Q8WZ94 311 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 HIST1H2AAQ96QV6 131 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 CMSS1Q9BQ75 279 aaKnown RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 SULT4A1Q9BR01 284 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PPA2Q9H2U2 334 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 CDH20Q9HBT6 801 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 PLSCR4Q9NRQ2 329 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF701Q9NV72 531 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 DKK4Q9UBT3 224 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF230Q9UIE0 474 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-202ENST00000439724 AK3Q9UIJ7 227 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 GPR132Q9UNW8 380 aa10.12□□□□□ -0.79
SMAD3-202ENST00000439724 RIF1Q5UIP0 2472 aaKnown RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 IGKV1D-8A0A087WSZ0 117 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 C9orf170A2RU37 121 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF732B4DXR9 585 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 MSTNO14793 375 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 TPD52L2O43399 206 aaKnown RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 SMPD2O60906 423 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 CRYABP02511 175 aaKnown RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 CELA3BP08861 270 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 CBR1P16152 277 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 HLA-GP17693 338 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 CD34P28906 385 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 HAAOP46952 286 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 IDH3GP51553 393 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 GPM6AP51674 278 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 TSPAN5P62079 268 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 SRSF4Q08170 494 aaKnown RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 DAZAP2Q15038 168 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 GRK1Q15835 563 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 LGALSLQ3ZCW2 172 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 LY6G6FQ5SQ64 297 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 DCAF12L2Q5VW00 463 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF585AQ6P3V2 769 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 MYPOPQ86VE0 399 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 MKXQ8IYA7 352 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 C17orf78Q8N4C9 275 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 UXS1Q8NBZ7 420 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 TMEM185AQ8NFB2 350 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 MITD1Q8WV92 249 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 HDHD3Q9BSH5 251 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-202ENST00000439724 FAAP24Q9BTP7 215 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 EHFQ9NZC4 300 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF581Q9P0T4 197 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
SMAD3-202ENST00000439724 ZNF292O60281 2723 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 PLSCR5A0PG75 271 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 TNFSF13O75888 250 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 TOXO94900 526 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 SIX6O95475 246 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 CGAP01215 116 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 CRHP06850 196 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 FCGR3AP08637 254 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 BCL3P20749 454 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 FUT3P21217 361 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 HOXC12P31275 282 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 PTGER4P35408 488 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 FGF12P61328 243 aa10.1□□□□□ -0.79
SMAD3-202ENST00000439724 PPP1CBP62140 327 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms