RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 IGFBP3P17936 291 aaPredicted RBP13.47□□□□□ -0.25
SNRPB-202ENST00000438552 PITPNBP48739 271 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 GPR50Q13585 617 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 KISS1Q15726 138 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 SMIM21Q3B7S5 101 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 FAM166AQ6J272 317 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 ACP7Q6ZNF0 438 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 NLRC3Q7RTR2 1065 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 PHC2Q8IXK0 858 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 OR52N4Q8NGI2 321 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 TMEM203Q969S6 136 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 CEP19Q96LK0 163 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 CCL13Q99616 98 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 NOX4Q9NPH5 578 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 MTCH1Q9NZJ7 389 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 CKLFQ9UBR5 152 aa13.47□□□□□ -0.25
SNRPB-202ENST00000438552 MTORP42345 2549 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 OR2AT4A6NND4 320 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 KIAA1324LA8MWY0 1029 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 F8VVB4 439 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 F8VWA3 439 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 TNFRSF13BO14836 293 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ANGPTL7O43827 346 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 NOS1APO75052 506 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 TNFAIP8O95379 198 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 SELLP14151 372 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ZFP36P26651 326 aaKnown RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 MAPK3P27361 379 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 PSMB9P28065 219 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ZP1P60852 638 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ERVK11-1P61568 191 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 GNB2P62879 340 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 PDZK1IP1Q13113 114 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 SSX1Q16384 188 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ACSM3Q53FZ2 586 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ARMCX4Q5H9R4 360 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 DDI2Q5TDH0 399 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 UBE2UQ5VVX9 321 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 SATL1Q86VE3 508 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 GLCCI1Q86VQ1 547 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 MS4A15Q8N5U1 240 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 FAM216BQ8N7L0 139 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 THRSPQ92748 146 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 SSBP3Q9BWW4 388 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-202ENST00000438552 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 SMURF1Q9HCE7 757 aa13.46□□□□□ -0.25
SNRPB-202ENST00000438552 ANK3Q12955 4377 aaKnown RBP13.46□□□□□ -0.26
SNRPB-202ENST00000438552 DOCK11Q5JSL3 2073 aa13.46□□□□□ -0.26
SNRPB-202ENST00000438552 IGKV1D-17A0A075B6S4 117 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 IGKV1-12A0A0C4DH73 117 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 NKX6-3A6NJ46 265 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 A8MXK9 166 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 GABRPO00591 440 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 TMPRSS2O15393 492 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 MAGEB3O15480 346 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 NDUFA2O43678 99 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 FCN3O75636 299 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 SC5DO75845 299 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 IGKV1D-12P01611 117 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 PSG2P11465 335 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 AMY2BP19961 511 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 BCL3P20749 454 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 BDKRB2P30411 391 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 TGFBR2P37173 567 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 NPBWR2P48146 333 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 CEBPDP49716 269 aaPredicted RBP13.45□□□□□ -0.26
SNRPB-202ENST00000438552 DVL1P1P54792 670 aaPredicted RBP13.45□□□□□ -0.26
SNRPB-202ENST00000438552 UNQ9370/PRO34162Q6UXP9 181 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 ZNF841Q6ZN19 808 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 MKXQ8IYA7 352 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 FGFRL1Q8N441 504 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 ANGPTL6Q8NI99 470 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 FCGR1BQ92637 280 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 TMEM186Q96B77 213 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 GAFA1Q96PS6 74 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 GPER1Q99527 375 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 TMEM138Q9NPI0 162 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 RBFOX1Q9NWB1 397 aaKnown RBP13.45□□□□□ -0.26
SNRPB-202ENST00000438552 HIF1ANQ9NWT6 349 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 RASL12Q9NYN1 266 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 IL36RNQ9UBH0 155 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 KCNS2Q9ULS6 477 aa13.45□□□□□ -0.26
SNRPB-202ENST00000438552 SF3B6Q9Y3B4 125 aaKnown RBP13.45□□□□□ -0.26
SNRPB-202ENST00000438552 A8MV72 311 aaPredicted RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 INAFM1C9JVW0 142 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 TRAPPC2LH3BP13 241 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 FOXH1O75593 365 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 GPX5O75715 221 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 CYB5AP00167 134 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 ACAA1P09110 424 aaPredicted RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 CALCBP10092 127 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 GABRA5P31644 462 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 GABRA2P47869 451 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 OR3A4PP47883 348 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 GP2P55259 537 aaKnown RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 IKZF1Q13422 519 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms