RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 URM1Q9BTM9 101 aaKnown RBP19.48■□□□□ 0.71
CPSF4-204ENST00000436336 ATG5Q9H1Y0 275 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 DYSFO75923 2080 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 CLDN25C9JDP6 229 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 CTAG2O75638 210 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 BCL3P20749 454 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 NPBWR2P48146 333 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 PPOXP50336 477 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 RPS27AP62979 156 aaKnown RBP19.47■□□□□ 0.71
CPSF4-204ENST00000436336 ZNF45Q02386 682 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 TLE4Q04727 773 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 TESK1Q15569 626 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 DTX2Q86UW9 622 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 MFSD4AQ8N468 514 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 OR4M1Q8NGD0 313 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 ERGIC1Q969X5 290 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 LPAR5Q9H1C0 372 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 UFSP2Q9NUQ7 469 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 TANC2Q9HCD6 1990 aa19.47■□□□□ 0.71
CPSF4-204ENST00000436336 HRNRQ86YZ3 2850 aaPredicted RBP19.46■□□□□ 0.71
CPSF4-204ENST00000436336 FABP12A6NFH5 140 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 PGA5P0DJD9 388 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 TNFRSF1AP19438 455 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 SPRNQ5BIV9 151 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 C11orf71Q6IPW1 123 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 WDR82Q6UXN9 313 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 BIVMQ86UB2 503 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 Q8IYB0 196 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 ZCCHC24Q8N2G6 241 aaKnown RBP19.46■□□□□ 0.71
CPSF4-204ENST00000436336 OSR2Q8N2R0 312 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 WDR12Q9GZL7 423 aaKnown RBP19.46■□□□□ 0.71
CPSF4-204ENST00000436336 EGLN1Q9GZT9 426 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 FN3KRPQ9HA64 309 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 UBTD1Q9HAC8 227 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 C1orf123Q9NWV4 160 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 V9GYH0 126 aa19.46■□□□□ 0.71
CPSF4-204ENST00000436336 NOS1APO75052 506 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-204ENST00000436336 ZNF846Q147U1 533 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 ZNF826PQ6ZT77 177 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 PHF21AQ96BD5 680 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 TM2D1Q9BX74 207 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 SELENOIQ9C0D9 397 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 DIABLOQ9NR28 239 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 DECR2Q9NUI1 292 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 A0A0A6YYH2 397 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 A6NJ64 397 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 TPD52L2O43399 206 aaKnown RBP19.45■□□□□ 0.7
CPSF4-204ENST00000436336 SCGNO76038 276 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 FGF12P61328 243 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 CCL8P80075 99 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 FAM131AQ6UXB0 335 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 POC1AQ8NBT0 407 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 OR10Z1Q8NGY1 313 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 ZNF488Q96MN9 340 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 GAL3ST1Q99999 423 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 SOSTQ9BQB4 213 aa19.45■□□□□ 0.7
CPSF4-204ENST00000436336 TRAF4Q9BUZ4 470 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-204ENST00000436336 RBFOX1Q9NWB1 397 aaKnown RBP19.45■□□□□ 0.7
CPSF4-204ENST00000436336 LRRK2Q5S007 2527 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 CD8AP01732 235 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 CHRM2P08172 466 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 SOD3P08294 240 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 CPT2P23786 658 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 CDK2P24941 298 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 PTBP1P26599 531 aaKnown RBP eCLIP19.44■□□□□ 0.7
CPSF4-204ENST00000436336 ERVK11-1P61568 191 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 RAB12Q6IQ22 244 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 BAIAP2L2Q6UXY1 529 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 MOGAT3Q86VF5 341 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 BATF2Q8N1L9 274 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 OR51T1Q8NGJ9 327 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 Q96M66 194 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 NRIP2Q9BQI9 281 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 SAP30LQ9HAJ7 183 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 GCM1Q9NP62 436 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 RABL2AQ9UBK7 228 aaPredicted RBP19.44■□□□□ 0.7
CPSF4-204ENST00000436336 RABL2BQ9UNT1 228 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 DSCAMO60469 2012 aa19.44■□□□□ 0.7
CPSF4-204ENST00000436336 hCG_1807616A0A1W2PRN6 198 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 F8VVB4 439 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 F8VWA3 439 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 XRCC3O43542 346 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 CFHR2P36980 270 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 NR4A2P43354 598 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 IL18Q14116 193 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 FAM89BQ8N5H3 189 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 DTX3Q8N9I9 347 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 POM121Q96HA1 1249 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 NICN1Q9BSH3 213 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 CLEC4MQ9H2X3 399 aaPredicted RBP19.43■□□□□ 0.7
CPSF4-204ENST00000436336 ST3GAL6Q9Y274 331 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 COL12A1Q99715 3063 aa19.43■□□□□ 0.7
CPSF4-204ENST00000436336 AKR7A2O43488 359 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 PITPNBP48739 271 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 VEGFCP49767 419 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 NHLRC3Q5JS37 347 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 TMEM69Q5SWH9 247 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 FAM58AQ8N1B3 248 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 OR56B1Q8NGI3 324 aa19.42■□□□□ 0.7
CPSF4-204ENST00000436336 Q8TCH9 128 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms