RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 LOXL3P58215 753 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 SKP2Q13309 424 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 LYG2Q86SG7 212 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 TEX101Q9BY14 249 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 PNPP00491 289 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 PDZD11Q5EBL8 140 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 LILRA3Q8N6C8 439 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 GPX5O75715 221 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 KLF7O75840 302 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 GABRG2P18507 467 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 FCN2Q15485 313 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 CCSMST1Q4G0I0 132 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM99Q8N816 258 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 OR1L3Q8NH93 324 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 NAT8BQ9UHF3 227 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 B9D1Q9UPM9 204 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 MPC1Q9Y5U8 109 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 WNT9BO14905 357 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 TO15178 435 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 GPR6P46095 362 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 RPEL1Q2QD12 228 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 ZBTB37Q5TC79 503 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 FAHD2BQ6P2I3 314 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 REC114Q7Z4M0 266 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 DRAXINQ8NBI3 349 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 FAHD2AQ96GK7 314 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 DOK1Q99704 481 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF665Q9H7R5 613 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 DEFB108AA8MXU0 73 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF629Q9UEG4 869 aaPredicted RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 PITPNC1Q9UKF7 332 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SF3B6Q9Y3B4 125 aaKnown RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 U3KQ87 197 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 IGSF23A1L1A6 192 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 OOEPA6NGQ2 149 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SOCS7O14512 581 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SIX6O95475 246 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 PTBP3O95758 552 aaKnown RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 MELTFP08582 738 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 PMCHP20382 165 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 CDAP32320 146 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 TGFBR1P36897 503 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 LPAR6P43657 344 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 ANKRD55Q3KP44 614 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF528Q3MIS6 628 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 C1orf174Q8IYL3 243 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 LINC00615Q96LM1 132 aaPredicted RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 OR2D2Q9H210 308 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SVILO95425 2214 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SULT1A1P50225 295 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SIGLEC14Q08ET2 396 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 FOXO1Q12778 655 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 PAQR6Q6TCH4 344 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 FAM219AQ8IW50 185 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 ARRDC1Q8N5I2 433 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 CCL4L1Q8NHW4 92 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 MARCH1Q8TCQ1 289 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 PLPPR2Q96GM1 343 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 GPR137Q96N19 417 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 UQCC2Q9BRT2 126 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 TUBA4BQ9H853 241 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 DHRS3O75911 302 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 RPS4Y1P22090 263 aaKnown RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 ERVFRD-1P60508 538 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
SCN4A-201ENST00000435607 FAM26EQ8N5C1 309 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 NTNG2Q96CW9 530 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 CEBPEQ15744 281 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 OR2W3Q7Z3T1 314 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 PTRH1Q86Y79 214 aaKnown RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 FGF14Q92915 247 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 DEDDO75618 318 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 EPHA8P29322 1005 aaPredicted RBP10□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM196Q5HYL7 178 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 TBC1D26Q86UD7 250 aa10□□□□□ -0.81
SCN4A-201ENST00000435607 LINC01565O15544 149 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 GPANK1O95872 356 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 HMGA1P17096 107 aaKnown RBP9.99□□□□□ -0.81
SCN4A-201ENST00000435607 MRPS11P82912 194 aaKnown RBP9.99□□□□□ -0.81
SCN4A-201ENST00000435607 SLC38A11Q08AI6 406 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 BAK1Q16611 211 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 SLC16A12Q6ZSM3 486 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 NUDCD2Q8WVJ2 157 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 RNF7Q9UBF6 113 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 ERRFI1Q9UJM3 462 aaPredicted RBP9.99□□□□□ -0.81
SCN4A-201ENST00000435607 CALCRP30988 508 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 OR2G2Q8NGZ5 317 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 C10orf90Q96M02 699 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 CHRNA10Q9GZZ6 450 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 TRAPPC4Q9Y296 219 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 NALCNQ8IZF0 1738 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 BSGP35613 385 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 ECSCRQ19T08 205 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM128Q5BJH2 165 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 STPG3Q8N7X2 389 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 OR10A7Q8NGE5 316 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 OR5A2Q8NGI9 324 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 PTP4A1Q93096 173 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms