RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 RPL10AP62906 217 aaKnown RBP1.65□□□□□ -2.15
PTPN4-205ENST00000433888 IFITM3Q01628 133 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 ADIGQ0VDE8 80 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 NAB1Q13506 487 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 PNOCQ13519 176 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 ZNHIT3Q15649 155 aaPredicted RBP1.65□□□□□ -2.15
PTPN4-205ENST00000433888 USF2Q15853 346 aaPredicted RBP1.65□□□□□ -2.15
PTPN4-205ENST00000433888 BSXQ3C1V8 233 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SLC25A35Q3KQZ1 300 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 RNASE13Q5GAN3 156 aaKnown RBP1.65□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF684Q5T5D7 378 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 HBMQ6B0K9 141 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 CLEC19AQ6UXS0 136 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SLC16A13Q7RTY0 426 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 LRRC6Q86X45 466 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 TMEM25Q86YD3 366 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 PDPNQ86YL7 162 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 LINC00337Q8N6G1 96 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 LINC00469Q8N7U9 141 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 TTLQ8NG68 377 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 OR4K2Q8NGD2 314 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 OR2Y1Q8NGV0 311 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 BLNKQ8WV28 456 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SMIM8Q96KF7 97 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 PGLYRP3Q96LB9 341 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 LINC01587Q99440 93 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 TEAD3Q99594 435 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SULT4A1Q9BR01 284 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SHCBP1LQ9BZQ2 653 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF436Q9C0F3 470 aaPredicted RBP1.65□□□□□ -2.15
PTPN4-205ENST00000433888 LINC00597Q9H2U6 94 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 POMKQ9H5K3 350 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SND1-IT1Q9HBX3 110 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 C8orf17Q9NRJ1 99 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 RHBDL2Q9NX52 303 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 TAS2R5Q9NYW4 299 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 VAPAQ9P0L0 249 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 FBXL3Q9UKT7 428 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 CFL2Q9Y281 166 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 OTOGLQ3ZCN5 2332 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 TUBGCP6Q96RT7 1819 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 IGHV6-1A0A0B4J1U7 121 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 A0A0U1RQV1 116 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 C1orf232A0A0U1RR37 186 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TMEM223A0PJW6 202 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 RNASEK-C17orf49H0YIS7 233 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 MKRN2OSH3BPM6 223 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 J3QLI3 93 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 K7EM74 188 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TNFRSF11BO00300 401 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 MYL12BO14950 172 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 AQP9O43315 295 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 COCHO43405 550 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 CHST10O43529 356 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 UPK1BO75841 260 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 CCNKO75909 580 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 CDK14O94921 469 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ATP6V1G2O95670 118 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 MMP7P09237 267 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ME2P23368 584 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 IL3RAP26951 378 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 HTR1DP28221 377 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 S100A2P29034 98 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 RAB25P57735 213 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TAS2R39P59534 338 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 LOXL1Q08397 574 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 PPIDQ08752 370 aaKnown RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 C2orf54Q08AI8 447 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 SLAMF1Q13291 335 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 FLOT2Q14254 428 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 SYCP1Q15431 976 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ZBTB6Q15916 424 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TMEM241Q24JQ0 296 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TMEM255AQ5JRV8 349 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 SYT6Q5T7P8 510 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 USP50Q70EL3 339 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 C10orf107Q8IVU9 208 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ITPRIPQ8IWB1 547 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 BLIDQ8IZY5 108 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 C17orf78Q8N4C9 275 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 GATD1Q8NB37 220 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 OR5T1Q8NG75 326 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 OR7G1Q8NGA0 311 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 OR4M2Q8NGB6 313 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 OR4M1Q8NGD0 313 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 OR2K2Q8NGT1 345 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 OR10G6Q8NH81 332 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 SUN5Q8TC36 379 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TMEM56Q96MV1 263 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 FAM210AQ96ND0 272 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 QKIQ96PU8 341 aaKnown RBP eCLIP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 NDFIP1Q9BT67 221 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 SFXN3Q9BWM7 321 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TAPBPLQ9BX59 468 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 SRRQ9GZT4 340 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 NXF2Q9GZY0 626 aaKnown RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 PARP12Q9H0J9 701 aaKnown RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 RPP21Q9H633 154 aaKnown RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF430Q9H8G1 570 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 RDH14Q9HBH5 336 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms