RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 RTBDNQ9BSG5 229 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 OSBPL11Q9BXB4 747 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SLC17A9Q9BYT1 436 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SLC19A3Q9BZV2 496 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 ARMC7Q9H6L4 198 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TAS2R1Q9NYW7 299 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 BTNL2Q9UIR0 455 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 RIMS3Q9UJD0 308 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 GOLT1BQ9Y3E0 138 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CLUHO75153 1309 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 USP42Q9H9J4 1324 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 KIF24Q5T7B8 1368 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 RTL9Q8NET4 1388 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CCDC144AA2RUR9 1427 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 WDR7Q9Y4E6 1490 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 F5H6K3 240 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 PFDN6O15212 129 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 ENTPD6O75354 484 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 UGT2B17O75795 530 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TRAPPC6AO75865 159 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 KRT75O95678 551 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CLIC3O95833 236 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 HLA-AP01891 365 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 ISG15P05161 165 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 BCHEP06276 602 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FBP1P09467 338 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 LIMS3P0CW19 117 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 LIMS4P0CW20 117 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 HIST1H1EP10412 219 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 AKR1C4P17516 323 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 NELFEP18615 380 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 TNFSF9P41273 254 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 MAP2K4P45985 399 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TTPAP49638 278 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 UGT2B15P54855 530 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TCL1AP56279 114 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 RPL31P62899 125 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 DEFA6Q01524 100 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 UNC119Q13432 240 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 GGTLC2Q14390 218 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TRIP13Q15645 432 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 KLHL12Q53G59 568 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 GPRC6AQ5T6X5 926 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SYT6Q5T7P8 510 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 RESP18Q5W5W9 173 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FAM131AQ6UXB0 335 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 ZNF429Q86V71 674 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 EIF4E3Q8N5X7 224 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 ATP6V0D2Q8N8Y2 350 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 OR10G3Q8NGC4 313 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 OR8J3Q8NGG0 315 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 OR5L1Q8NGL2 311 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SLC7A13Q8TCU3 470 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SMIM19Q96E16 107 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SFRP2Q96HF1 295 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 ADTRPQ96IZ2 230 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 OR10C1Q96KK4 312 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 KCTD7Q96MP8 289 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 Q96MT0 163 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CLCC1Q96S66 551 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TBX5Q99593 518 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 AIF1LQ9BQI0 150 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 C2orf88Q9BSF0 95 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TMED9Q9BVK6 235 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 PPDPFQ9H3Y8 114 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 DHX35Q9H5Z1 703 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 METTL17Q9H7H0 456 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 WFDC1Q9HC57 220 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 POLD4Q9HCU8 107 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 BFARQ9NZS9 450 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 PRELID3BQ9Y3B1 194 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 BRCA1P38398 1863 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 IGLV3-22A0A075B6J6 115 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 LOC100131303A0A0U1RQF7 123 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 CENPVL3A0A0U1RRI6 287 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 ANKRD20A5PA0PJZ0 165 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 GJE1A6NN92 205 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 SEC14L6B5MCN3 397 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 TSTD3H0UI37 97 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 TXNDC9O14530 226 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 RAD51CO43502 376 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 CHP2O43745 196 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 RP2O75695 350 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 OR7A10O76100 309 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 S1PR2O95136 353 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 PTTG1O95997 202 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 CST2P09228 141 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 C8orf88P0DMB2 117 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 SCGB1A1P11684 91 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 HIST1H1CP16403 213 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 PVALBP20472 110 aaPredicted RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 CXCR1P25024 350 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 ATP5A1P25705 553 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 S100PP25815 95 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 ARR3P36575 388 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 RFC3P40938 356 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 SRP9P49458 86 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 RAB7AP51149 207 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 CLDN6P56747 220 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 TAS2R39P59534 338 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms