RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RABL2AQ9UBK7 228 aaPredicted RBP1.07□□□□□ -2.24
CDC40-204ENST00000431461 VAX2Q9UIW0 290 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 ACOT9Q9Y305 439 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 KLF12Q9Y4X4 402 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 ORC6Q9Y5N6 252 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 GPR179Q6PRD1 2367 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 TTC41PQ6P2S7 1318 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 DHX57Q6P158 1386 aaKnown RBP1.07□□□□□ -2.24
CDC40-204ENST00000431461 TICRRQ7Z2Z1 1910 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 TRIP11Q15643 1979 aa1.07□□□□□ -2.24
CDC40-204ENST00000431461 ANKRD12Q6UB98 2062 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 ZNF608Q9ULD9 1512 aaPredicted RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 NEURL4Q96JN8 1562 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 LOC102724200A0A096LPH7 203 aaPredicted RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 FAM240AA0A1B0GVK7 77 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 VGLL3A8MV65 326 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 IGLL5B9A064 214 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 TEX46H3BTG2 121 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 J3QT63 122 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 K7ERS5 55 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 M0R1B8 84 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 UPK1AO00322 258 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 SIVA1O15304 175 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 AKR7A2O43488 359 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 CXorf1O96002 111 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 MBP02144 154 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 SRMP19623 302 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 BGNP21810 368 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 GNRHRP30968 328 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 TUFMP49411 452 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 ACOT2P49753 483 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 GZMMP51124 257 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 MLF1P58340 268 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 RPL31P62899 125 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 IRF8Q02556 426 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 ENDOGQ14249 297 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 PMVKQ15126 192 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 TSC22D1Q15714 1073 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 LINC00303Q3SY05 128 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 HIKESHIQ53FT3 197 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 TBPL2Q6SJ96 375 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 TMEM136Q6ZRR5 245 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 TMPPEQ6ZT21 453 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 FA2HQ7L5A8 372 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 LYZL2Q7Z4W2 148 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 NELFCDQ8IXH7 590 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 FAM58AQ8N1B3 248 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 ZNF738Q8NE65 137 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 OR52K1Q8NGK4 314 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 CASTOR1Q8WTX7 329 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 DYNLL2Q96FJ2 89 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 CENPNQ96H22 339 aaPredicted RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 PPP1R36Q96LQ0 422 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 OR2V2Q96R30 315 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 PKMYT1Q99640 499 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 LINC00574Q9H8X3 128 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 CRLF2Q9HC73 371 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 FAM60AQ9NP50 221 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 RPRD1BQ9NQG5 326 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 PARP11Q9NR21 331 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 DIABLOQ9NR28 239 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 FBXO8Q9NRD0 319 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 DDX18Q9NVP1 670 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 ZNF391Q9UJN7 358 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 RHBDD3Q9Y3P4 386 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 CHTOPQ9Y3Y2 248 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 INSIG2Q9Y5U4 225 aa1.06□□□□□ -2.24
CDC40-204ENST00000431461 BZW2Q9Y6E2 419 aaKnown RBP1.06□□□□□ -2.24
CDC40-204ENST00000431461 ARPC4-TTLL3A0A0A6YYG9 625 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.05□□□□□ -2.24
CDC40-204ENST00000431461 C15orf65H3BRN8 121 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 IGHV3-53P01767 116 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 IGHG2P01859 326 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 HLA-AP01891 365 aaKnown RBP1.05□□□□□ -2.24
CDC40-204ENST00000431461 OR5AC1P0C628 307 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 STAG3L2P0CL84 134 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 SCGB1C2P0DMR2 95 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 CD28P10747 220 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 TEAD1P28347 426 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 IL12BP29460 328 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 CFHR2P36980 270 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 TTPAP49638 278 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 PAFAH1B2P68402 229 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 ELF3P78545 371 aaPredicted RBP1.05□□□□□ -2.24
CDC40-204ENST00000431461 ELOCQ15369 112 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 ZNF404Q494X3 552 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 DEFB134Q4QY38 66 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 UBE2NLQ5JXB2 153 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 CLLU1OSQ5K130 101 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 FAM27D1Q5T7N8 215 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 CLEC18BQ6UXF7 455 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 BRD3OSQ6XYD6 125 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 SETD3Q86TU7 594 aaPredicted RBP1.05□□□□□ -2.24
CDC40-204ENST00000431461 ITPRIPQ8IWB1 547 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 PDCL2Q8N4E4 241 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 OR8K3Q8NH51 312 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 OR51A7Q8NH64 312 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 FAM57AQ8TBR7 257 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 SCGB1C1Q8TD33 95 aa1.05□□□□□ -2.24
CDC40-204ENST00000431461 TCP10LQ8TDR4 215 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms