RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
CACTIN-203ENST00000429344 SHANK1Q9Y566 2161 aa13.11□□□□□ -0.31
CACTIN-203ENST00000429344 COLCA2A8K830 154 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 FPR2P25090 351 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 PTGER4P35408 488 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 RGS19P49795 217 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 IL11RAQ14626 422 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 TMEM164Q5U3C3 297 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 ARRDC1Q8N5I2 433 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 R4GN57 208 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 IGKV1D-8A0A087WSZ0 117 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 GPR37O15354 613 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 SPRY1O43609 319 aaPredicted RBP13.1□□□□□ -0.31
CACTIN-203ENST00000429344 RAMP1O60894 148 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 PNLIPP16233 465 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 SSR4P51571 173 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 KISS1Q15726 138 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 GUK1Q16774 197 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 FAHD2BQ6P2I3 314 aaPredicted RBP13.1□□□□□ -0.31
CACTIN-203ENST00000429344 FAHD2AQ96GK7 314 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 FRYLO94915 3013 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 WDFY3Q8IZQ1 3526 aa13.1□□□□□ -0.31
CACTIN-203ENST00000429344 HKR1P10072 659 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 SH3BGRL3Q9H299 93 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 GPR173Q9NS66 373 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 PARPBPQ9NWS1 579 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 C1orf123Q9NWV4 160 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 TMEM14DPA8MWL7 114 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 ISG15P05161 165 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 CD63P08962 238 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 ZNF708P17019 499 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 SPINK2P20155 84 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 OR14L1PQ8NHC6 308 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 PRRX2Q99811 253 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 FAAP24Q9BTP7 215 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 LOXL2Q9Y4K0 774 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 LHFPL6Q9Y693 200 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 LRP4O75096 1905 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 IGHG1P01857 330 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 P04436 131 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 IFNA4P05014 189 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 HPNP05981 417 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 DBHP09172 617 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 GSTP1P09211 210 aaKnown RBP13.09□□□□□ -0.31
CACTIN-203ENST00000429344 NOVA1P51513 510 aaKnown RBP13.09□□□□□ -0.31
CACTIN-203ENST00000429344 CLDN17P56750 224 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 PIGPP57054 158 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 SSX2Q16385 188 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 PCK2Q16822 640 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 GPHA2Q96T91 129 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 SSX3Q99909 188 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 TECTAO75443 2155 aa13.09□□□□□ -0.31
CACTIN-203ENST00000429344 NPIPA2E9PIF3 369 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 NPIPA3F8WFD2 350 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 HLA-GP17693 338 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 DVL1P1P54792 670 aaPredicted RBP13.08□□□□□ -0.31
CACTIN-203ENST00000429344 NAAAQ02083 359 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 OR2AE1Q8NHA4 323 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 GSN-AS1Q9NRJ2 163 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 PIGLQ9Y2B2 252 aa13.08□□□□□ -0.31
CACTIN-203ENST00000429344 SCGNO76038 276 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 YIF1AO95070 293 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 HNF4GQ14541 408 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 SPIN3Q5JUX0 258 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 C5orf46Q6UWT4 87 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.32
CACTIN-203ENST00000429344 FAM212BQ9NTI7 297 aaPredicted RBP13.08□□□□□ -0.32
CACTIN-203ENST00000429344 OR5H15A6NDH6 313 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 DHRS7CA6NNS2 312 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 NPIPB7O75200 414 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 SRSF10O75494 262 aaKnown RBP13.08□□□□□ -0.32
CACTIN-203ENST00000429344 CST4P01036 141 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 G0S2P27469 103 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 TMEM217Q8N7C4 229 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 MAGT1Q9H0U3 335 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 TMEM100Q9NV29 134 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 ZNF581Q9P0T4 197 aa13.08□□□□□ -0.32
CACTIN-203ENST00000429344 ZNF107Q9UII5 783 aaPredicted RBP13.08□□□□□ -0.32
CACTIN-203ENST00000429344 LOC390937A0A1W2PQ73 354 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 CDRT15L2A8MXV6 281 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 ATXN7O15265 892 aaPredicted RBP13.07□□□□□ -0.32
CACTIN-203ENST00000429344 CD37P11049 281 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 NDUFA6P56556 154 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 TAS2R46P59540 309 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 NHLH2Q02577 135 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 HAGHQ16775 308 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 NFAM1Q8NET5 270 aaPredicted RBP13.07□□□□□ -0.32
CACTIN-203ENST00000429344 PLEK2Q9NYT0 353 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 KCNIP3Q9Y2W7 256 aa13.07□□□□□ -0.32
CACTIN-203ENST00000429344 LY6G6EA0A0G2JKS1 128 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms