RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 POC1AQ8NBT0 407 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 TSPAN14Q8NG11 270 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 CEP19Q96LK0 163 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 PKIBQ9C010 78 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 TCF7L1Q9HCS4 588 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 TMEM138Q9NPI0 162 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 MTCH1Q9NZJ7 389 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 NLKQ9UBE8 527 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 ZANQ9Y493 2812 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 TEP1Q99973 2627 aaKnown RBP12.16□□□□□ -0.46
SGCE-204ENST00000428696 TRAV8-7A0A075B6U6 113 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 NKX6-3A6NJ46 265 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 NDUFA2O43678 99 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 CD5LO43866 347 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 MSMBP08118 114 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 PGA5P0DJD9 388 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 BCL3P20749 454 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 NPBWR2P48146 333 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 CAPZA1P52907 286 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 SMIM21Q3B7S5 101 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 FAM27D1Q5T7N8 215 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 TEX36Q5VZQ5 186 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 FAM166AQ6J272 317 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 JAGN1Q8N5M9 183 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 TNFAIP8L1Q8WVP5 186 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 FCGR1BQ92637 280 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 EMG1Q92979 244 aaKnown RBP12.16□□□□□ -0.46
SGCE-204ENST00000428696 CPNE2Q96FN4 548 aaPredicted RBP12.16□□□□□ -0.46
SGCE-204ENST00000428696 S100A13Q99584 98 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 SSBP3Q9BWW4 388 aaPredicted RBP12.16□□□□□ -0.46
SGCE-204ENST00000428696 SMURF1Q9HCE7 757 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 HIF1ANQ9NWT6 349 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 RASL12Q9NYN1 266 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 KCNS2Q9ULS6 477 aa12.16□□□□□ -0.46
SGCE-204ENST00000428696 A0A087WXM4 84 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 TRBV5-7A0A0A0MS05 114 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 RFPL4AA6NLU0 287 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 A8MV72 311 aaPredicted RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 RFPL4AL1F8VTS6 287 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 F8VVB4 439 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 F8VWA3 439 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 FOXH1O75593 365 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 RGS9O75916 674 aaPredicted RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 ZFP36P26651 326 aaKnown RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 DUSP1P28562 367 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 ZNF93P35789 620 aaPredicted RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 SCN1BQ07699 218 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 HSD17B12Q53GQ0 312 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 ASPHD2Q6ICH7 369 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 SLC36A1Q7Z2H8 476 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 GLCCI1Q86VQ1 547 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 ST8SIA4Q92187 359 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 THRSPQ92748 146 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
SGCE-204ENST00000428696 NRIP2Q9BQI9 281 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 SLITRK2Q9H156 845 aa12.15□□□□□ -0.46
SGCE-204ENST00000428696 A0A1B0GW55 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DVL1O14640 695 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 PIN1P1O15428 100 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 NDUFB3O43676 98 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 ALX3O95076 343 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L2P0CJ85 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L3P0CJ86 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L4P0CJ87 422 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L5P0CJ88 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L6P0CJ89 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L7P0CJ90 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 PSG2P11465 335 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 PRKACAP17612 351 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 PCMT1P22061 227 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 MPZP25189 248 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 GABRA5P31644 462 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 PRDX2P32119 198 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 RSU1Q15404 277 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 TRAM1Q15629 374 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 UBE2UQ5VVX9 321 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4L9Q6RFH8 374 aaPredicted RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 FIP1L1Q6UN15 594 aaKnown RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 H1FXQ92522 213 aaKnown RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 TMEM186Q96B77 213 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 C12orf43Q96C57 262 aaKnown RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 MED30Q96HR3 178 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 VCX3AQ9NNX9 186 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 EXOSC4Q9NPD3 245 aaKnown RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 RBFOX1Q9NWB1 397 aaKnown RBP12.14□□□□□ -0.47
SGCE-204ENST00000428696 DUX4Q9UBX2 424 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
SGCE-204ENST00000428696 CR1P17927 2039 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 MAGEA13PA6NCF6 341 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 CCRL2O00421 344 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms