RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 OR4C13Q8NGP0 309 aa12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 OR8J1Q8NGP2 316 aa12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 SSX3Q99909 188 aa12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 RBM4BQ9BQ04 359 aaKnown RBP12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 MEGF9Q9H1U4 602 aa12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 PPA2Q9H2U2 334 aa12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 RANBP3Q9H6Z4 567 aaPredicted RBP12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 ELL3Q9HB65 397 aaPredicted RBP12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 FBLN5Q9UBX5 448 aa12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 MRM2Q9UI43 246 aaKnown RBP12.63□□□□□ -0.39
CTDSP1-202ENST00000428361 METTL15A6NJ78 407 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 H3BUX3 64 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 SYNGR1O43759 233 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 RPP14O95059 124 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 CYB5AP00167 134 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 RBP4P02753 201 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 TFF1P04155 84 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 TK1P04183 234 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 CHRM2P08172 466 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 UBCP0CG48 685 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 FUT6P51993 359 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 SRSF4Q08170 494 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 CNN3Q15417 329 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 Q8IYB0 196 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 CD177Q8N6Q3 437 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 FOXRED1Q96CU9 486 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 CENPNQ96H22 339 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 CIB1Q99828 191 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 HES4Q9HCC6 221 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 C19orf12Q9NSK7 152 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 OR14J1Q9UGF5 321 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 ORC6Q9Y5N6 252 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 MEGF8Q7Z7M0 2845 aa12.62□□□□□ -0.39
CTDSP1-202ENST00000428361 WNK1Q9H4A3 2382 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 A0A1B0GTI1 187 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 SNTNA6NMZ2 147 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 ACTC1P68032 377 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 ACTA1P68133 377 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 PRB3Q04118 309 aaPredicted RBP12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 PDLIM3Q53GG5 364 aaPredicted RBP12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 DMRTC1Q5HYR2 192 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 TMEM200BQ69YZ2 307 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 ASPHD2Q6ICH7 369 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 Q6ZTK2 550 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 CATSPERDQ86XM0 798 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 ASCC1Q8N9N2 400 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 OR10H4Q8NGA5 316 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 OR13D1Q8NGV5 346 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 OR2T6Q8NHC8 308 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 TRUB1Q8WWH5 349 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 PP6455Q8WZ26 134 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 PPP1R14AQ96A00 147 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 CEP19Q96LK0 163 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 CDCA4Q9BXL8 241 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 GABARAPL3Q9BY60 117 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 NPFFR1Q9GZQ6 430 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 IMPAD1Q9NX62 359 aa12.61□□□□□ -0.39
CTDSP1-202ENST00000428361 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 A0A1W2PQL4 384 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 H3BUI4 141 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 K7N7A8 449 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 M0R129 80 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 KCNAB3O43448 404 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 EPHA2P29317 976 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 DLX1P56177 255 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 ERVK11-1P61568 191 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 KCTD20Q7Z5Y7 419 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 AMIGO2Q86SJ2 522 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 PNKDQ8N490 385 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 TRMT10AQ8TBZ6 339 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 MRPL48Q96GC5 212 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 ZNF488Q96MN9 340 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 TBX5Q99593 518 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 NEK6Q9HC98 313 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 ABCB10Q9NRK6 738 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 FAM53CQ9NYF3 392 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 GLS2Q9UI32 602 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 PITPNC1Q9UKF7 332 aa12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 TBL2Q9Y4P3 447 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-202ENST00000428361 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 TMEM244Q5VVB8 128 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 SLC35E4Q6ICL7 350 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 HCP5Q6MZN7 132 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 DNAAF1Q8NEP3 725 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 OR4M1Q8NGD0 313 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 RORBQ92753 470 aa12.59□□□□□ -0.39
CTDSP1-202ENST00000428361 SEBOXQ9HB31 216 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms