RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CEACAM1P13688 526 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 GPR3P46089 330 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TNFSF10P50591 281 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 METAP1P53582 386 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 RAB11AP62491 216 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 EGR4Q05215 589 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 SMAD4Q13485 552 aaKnown RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 GLIPR1L1Q6UWM5 242 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 C11orf42Q8N5U0 333 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 OR5D14Q8NGL3 314 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 GPR119Q8TDV5 335 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 ARRDC3Q96B67 414 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 C1orf147Q96MC9 270 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM59Q9BXS4 323 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 GPR35Q9HC97 309 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 MRPS28Q9Y2Q9 187 aaKnown RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 SPACA6W5XKT8 324 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TRPM6Q9BX84 2022 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 A0A1W2PN81 502 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 ATXN7O15265 892 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 CTHP32929 405 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 CHRNA7P36544 502 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 HIST1H3AP68431 136 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM187Q14656 261 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 GNMTQ14749 295 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 FBXW12Q6X9E4 464 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF100Q8IYN0 542 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 SVIPQ8NHG7 77 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 PTPMT1Q8WUK0 201 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 IRF7Q92985 503 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TM4SF19Q96DZ7 209 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 P2RX4Q99571 388 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM74BQ9NUR3 256 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 AURKAIP1Q9NWT8 199 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 LAMP3Q9UQV4 416 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 MRPS23Q9Y3D9 190 aaKnown RBP14.12□□□□□ -0.15
C9orf3-206ENST00000428313 CENPFP49454 3210 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 SLC16A7O60669 478 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 KLF8O95600 359 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-206ENST00000428313 RAB7AP51149 207 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 DEGS2Q6QHC5 323 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 FOXN4Q96NZ1 517 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 IMMP2LQ96T52 175 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 CALHM2Q9HA72 323 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 C20orf202A1L168 122 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 NKX6-3A6NJ46 265 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 KLF3P57682 345 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-206ENST00000428313 OR2C3Q8N628 320 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF519Q8TB69 540 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 EXTL1Q92935 676 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 ADAT3Q96EY9 351 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-206ENST00000428313 C18orf12Q96KH6 178 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 C11orf1Q9H5F2 150 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 Q9N2K0 584 aa14.11□□□□□ -0.15
C9orf3-206ENST00000428313 ARID1AO14497 2285 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 GPR89AB7ZAQ6 455 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 PCCBP05166 539 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 GPR89BP0CG08 455 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 HNF1AP20823 631 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 CENPVQ7Z7K6 275 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-206ENST00000428313 OR51G1Q8NGK1 321 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 OR2AJ1Q8NGZ0 328 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 ZCCHC14Q8WYQ9 949 aaKnown RBP14.1□□□□□ -0.15
C9orf3-206ENST00000428313 TBX15Q96SF7 602 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 NAA60Q9H7X0 242 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 RFNGQ9Y644 331 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 BCL2P10415 239 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 RPL27P61353 136 aaKnown RBP14.1□□□□□ -0.15
C9orf3-206ENST00000428313 ARL6IP1Q15041 203 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 TEX43Q6ZNM6 134 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 GRINAQ7Z429 371 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 CMTM1Q8IZ96 169 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM52Q8NDY8 209 aa14.1□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF2Q9BSG1 426 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-206ENST00000428313 TRBV11-1A0A0K0K1C0 115 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF705FA8MVS1 300 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-206ENST00000428313 HIDE1A8MVS5 230 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 DBHP09172 617 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 H2BFMP0C1H6 154 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF705DP0CH99 300 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF705BP0CI00 300 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-206ENST00000428313 CHRNB4P30926 498 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 H1FOOQ8IZA3 346 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-206ENST00000428313 FAM89BQ8N5H3 189 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 ORAOV1Q8WV07 137 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 FAM122AQ96E09 287 aa14.09□□□□□ -0.15
C9orf3-206ENST00000428313 LOC101059948A0A1B0GTJ6 334 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 CYR61O00622 381 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 TYMSP04818 313 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 TDGF1P13385 188 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 CTLA4P16410 223 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 MTCP1P56278 107 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 IL24Q13007 206 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 RTL6Q6ICC9 239 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 ARMC6Q6NXE6 501 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 C16orf82Q7Z2V1 217 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 P4HA3Q7Z4N8 544 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 OR52M1Q8NGK5 317 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 OR4D5Q8NGN0 318 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms