RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LSM5Q9Y4Y9 91 aaKnown RBP9.4□□□□□ -0.91
TCOF1-204ENST00000427724 NDUFB3O43676 98 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 HOXB5P09067 269 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 MGMTP16455 207 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 FABP9Q0Z7S8 132 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 KIAA0141Q14154 515 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SHEQ5VZ18 495 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 OR1S2Q8NGQ3 325 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 OR1F12Q8NHA8 337 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SAP30LQ9HAJ7 183 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 GPR84Q9NQS5 396 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 TLN1Q9Y490 2541 aaKnown RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 BORCS7-ASMTA0A0B4J1R7 106 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 LOC107986453A0A1B0GWG9 222 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 RER1O15258 196 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 EPPINO95925 133 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 OR8U9P0C7N5 309 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SPP1P10451 314 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 CXCL2P19875 107 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 MEF2DQ14814 521 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 CD200R1LQ6Q8B3 271 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF75AQ96N20 296 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 ANGPTL4Q9BY76 406 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 BANF2Q9H503 90 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 CA10Q9NS85 328 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 AMDHD2Q9Y303 409 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 LIPGQ9Y5X9 500 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 URGCP-MRPS24S4R325 110 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 NME2P1O60361 137 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 TBX6O95947 436 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 F12P00748 615 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 CELA3AP09093 270 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 CDKN2AP42771 156 aaKnown RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 CYCSP99999 105 aaKnown RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF141Q15928 474 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 MICBQ29980 383 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 TSPO2Q5TGU0 170 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SEZ6L2Q6UXD5 910 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 ANGPTL5Q86XS5 388 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 REEP6Q96HR9 211 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 PRSS27Q9BQR3 290 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 B9D1Q9UPM9 204 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 PPP1R3CQ9UQK1 317 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SMCO3A2RU48 225 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SNRPGP15A8MWD9 76 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SIRPB1O00241 398 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SLC33A1O00400 549 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 XRCC2O43543 280 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SMPD2O60906 423 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 LY86O95711 162 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 RPS2P15880 293 aaKnown RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF93P35789 620 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 GPR6P46095 362 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-204ENST00000427724 SPNS3Q6ZMD2 512 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 OR2W3Q7Z3T1 314 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 GABRG1Q8N1C3 465 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 MCHR2Q969V1 340 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
TCOF1-204ENST00000427724 H7C417 338 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 AQP7O14520 342 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 IMPA2O14732 288 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 NRASP01111 189 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 UMODP07911 640 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 GAAP10253 952 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 ERGP11308 486 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 CA6P23280 308 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 HAAOP46952 286 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 CCL8P80075 99 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 OR51F2Q8NH61 342 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 WNT2BQ93097 391 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 PERPQ96FX8 193 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 PLPPR2Q96GM1 343 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 MRPS28Q9Y2Q9 187 aaKnown RBP9.38□□□□□ -0.91
TCOF1-204ENST00000427724 ADAM20O43506 726 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 CNIH1O95406 144 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 PMS2P2O95744 297 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 RFPL3SP0C7P2 107 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 IL3RAP26951 378 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 RBP2P50120 134 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 BATFQ16520 125 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 RNF212Q495C1 297 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 MRPL14Q6P1L8 145 aaKnown RBP9.38□□□□□ -0.91
TCOF1-204ENST00000427724 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 PPP1R1CQ8WVI7 109 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 MESP1Q9BRJ9 268 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 PBDC1Q9BVG4 233 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 FOXJ3Q9UPW0 622 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 SPINT2O43291 252 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 DUSP1P28562 367 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
TCOF1-204ENST00000427724 LRRC10Q5BKY1 277 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 ACOT7LQ6ZUV0 252 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 MUC20Q8N307 709 aaPredicted RBP9.38□□□□□ -0.91
TCOF1-204ENST00000427724 SLAMF9Q96A28 289 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 TIMP4Q99727 224 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 KCNK15Q9H427 330 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms