RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 ME2P23368 584 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 MYL9P24844 172 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 IVDP26440 423 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 ARL2P36404 184 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 COILP38432 576 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 TNFSF9P41273 254 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 EIF1P41567 113 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RPS5P46782 204 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 CXCL12P48061 93 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 GCLMP48507 274 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 SLC18A1P54219 525 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RWDD2BP57060 319 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF121P58317 390 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 GNGT1P63211 74 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 DR1Q01658 176 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 CAV1Q03135 178 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 GBE1Q04446 702 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 PPIDQ08752 370 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 CDC20Q12834 499 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 TFDP2Q14188 446 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 ITIH4Q14624 930 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 CLEC2AQ6UVW9 174 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 TRMT10CQ7L0Y3 403 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 BHLHA15Q7RTS1 189 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 SLC16A13Q7RTY0 426 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 UNC93AQ86WB7 457 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 PHF13Q86YI8 300 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 SLC13A5Q86YT5 568 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 VKORC1L1Q8N0U8 176 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RIBC1Q8N443 379 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 PQLC3Q8N755 202 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 UBL4BQ8N7F7 174 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 UBAC2Q8NBM4 344 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 C11orf72Q8NBR9 251 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 TTLQ8NG68 377 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 OR56A4Q8NGH8 313 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 OR1J4Q8NGS1 313 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 OR52E5Q8NH55 327 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 AGR3Q8TD06 166 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 CA5BP1Q8WTZ4 195 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 IFT81Q8WYA0 676 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RAB1CQ92928 201 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RERGQ96A58 199 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 MAGOHBQ96A72 148 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 HAUS1Q96CS2 278 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RNF145Q96MT1 663 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 UQCC2Q9BRT2 126 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RSG1Q9BU20 258 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 CALN1Q9BXU9 219 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 PORCNQ9H237 461 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 MRPS30Q9NP92 439 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 XPNPEP1Q9NQW7 623 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 EURLQ9NYK6 297 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 SLC17A7Q9P2U7 560 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RABL2AQ9UBK7 228 aaPredicted RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 RCL1Q9Y2P8 373 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 YARS2Q9Y2Z4 477 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 UTP11Q9Y3A2 253 aaKnown RBP1.4□□□□□ -2.19
PTPRC-208ENST00000427110 GREB1Q4ZG55 1949 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 MROH7Q68CQ1 1323 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 ADGRA3Q8IWK6 1321 aa1.4□□□□□ -2.19
PTPRC-208ENST00000427110 MYLKQ15746 1914 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 IGLV3-12A0A075B6K2 115 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 TRAV25A0A0B4J276 109 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 IGHV3OR16-9A0A0B4J2B5 98 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 IGKV1-8A0A0C4DH67 115 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 CENPVL3A0A0U1RRI6 287 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 GSTTP1A0A1W2PQM5 241 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 A0A1W2PRD5 423 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 TMEM120BA0PK00 339 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 GOLGA8IPA6NC78 632 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 GOLGA6L10A6NI86 522 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 GOLGA8JA6NMD2 632 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 KRBOX1C9JBD0 128 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 BCKDKO14874 412 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 POLR1CO15160 346 aaPredicted RBP1.39□□□□□ -2.19
PTPRC-208ENST00000427110 SOCS1O15524 211 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 SPOPO43791 374 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 SLC19A2O60779 497 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 TTC4O95801 387 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 PAHP00439 452 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 ASS1P00966 412 aaKnown RBP1.39□□□□□ -2.19
PTPRC-208ENST00000427110 IGHV3-11P01762 117 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 HLA-DRAP01903 254 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 CALB1P05937 261 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 PGA4P0DJD7 388 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 PGA3P0DJD8 388 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 PGA5P0DJD9 388 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF14P17017 642 aaPredicted RBP1.39□□□□□ -2.19
PTPRC-208ENST00000427110 PFN2P35080 140 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 MARCKSL1P49006 195 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 SERPINB8P50452 374 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 FABP6P51161 128 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 PLTPP55058 493 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 MAGOHP61326 146 aaKnown RBP1.39□□□□□ -2.19
PTPRC-208ENST00000427110 RPS15AP62244 130 aaKnown RBP1.39□□□□□ -2.19
PTPRC-208ENST00000427110 MRPS25P82663 173 aaKnown RBP1.39□□□□□ -2.19
PTPRC-208ENST00000427110 RAD51Q06609 339 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF33AQ06730 810 aa1.39□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF816Q0VGE8 651 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms