RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MIDNQ504T8 468 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 RABEPKQ7Z6M1 372 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 OR5AS1Q8N127 324 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 HSD17B6O14756 317 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 IFNA2P01563 188 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 ZFP36L1Q07352 338 aaKnown RBP11.71□□□□□ -0.54
USP42-203ENST00000426246 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 PLPP5Q8NEB5 264 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 RTN4IP1Q8WWV3 396 aaPredicted RBP11.71□□□□□ -0.54
USP42-203ENST00000426246 ST8SIA1Q92185 356 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 RDH5Q92781 318 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 CLCC1Q96S66 551 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 PIGQQ9BRB3 760 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 RNF126Q9BV68 326 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 CALHM2Q9HA72 323 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 B3GAT1Q9P2W7 334 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 SRPK3Q9UPE1 567 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 NPIPB7O75200 414 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 CD1AP06126 327 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 ADCYAP1P18509 176 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 P2RY4P51582 365 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 C3AR1Q16581 482 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 GGNBP1Q5YKI7 109 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 DTX1Q86Y01 620 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 ZNF441Q8N8Z8 693 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 RXFP4Q8TDU9 374 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 SH3BGRL3Q9H299 93 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 ZFHX2Q9C0A1 2572 aaPredicted RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 DMXL1Q9Y485 3027 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 ZNF44P15621 663 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 IGFBP3P17936 291 aaPredicted RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 OR2B11Q5JQS5 317 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 ZNF468Q5VIY5 522 aaPredicted RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 SPACA9Q96E40 222 aaPredicted RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 ST3GAL6Q9Y274 331 aa11.7□□□□□ -0.54
USP42-203ENST00000426246 HEATR1Q9H583 2144 aaKnown RBP11.7□□□□□ -0.54
USP42-203ENST00000426246 A6NLC8 198 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 SNAPINO95295 136 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 SFT2D2O95562 160 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 CHRM2P08172 466 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 ZNF728P0DKX0 622 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 MSR1P21757 451 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 ZNF84P51523 738 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 MPPED2Q15777 294 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 PLPPR5Q32ZL2 321 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 SLC16A14Q7RTX9 510 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 IP6K3Q96PC2 410 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 GLS2Q9UI32 602 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 HSPA12AO43301 675 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 PTGER4P35408 488 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 F2RL1P55085 397 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 DOK3Q7L591 496 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 GJC3Q8NFK1 279 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 PECRQ9BY49 303 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 C12orf10Q9HB07 376 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 TRAF3IP2O43734 574 aaPredicted RBP11.69□□□□□ -0.54
USP42-203ENST00000426246 SOX15O60248 233 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 NQO2P16083 231 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 GDF1P27539 372 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 TAS2R31P59538 309 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 C4orf17Q53FE4 359 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 TFAP2EQ6VUC0 442 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 RBMS3Q6XE24 437 aaKnown RBP11.69□□□□□ -0.54
USP42-203ENST00000426246 POC1BQ8TC44 478 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 C2orf50Q96LR7 162 aa11.69□□□□□ -0.54
USP42-203ENST00000426246 APC2O95996 2303 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 FAM24AA6NFZ4 105 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 C9J4A7 227 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 DHHO43323 396 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 FBP1P09467 338 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 MPLP40238 635 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 RPS10P46783 165 aaKnown RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 VAMP2P63027 116 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 FAM166AQ6J272 317 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 AAED1Q7RTV5 226 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ZNF565Q8N9K5 539 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 OR4A4PQ8NGN8 299 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 RPS4Y2Q8TD47 263 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 WBP1Q96G27 269 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ZNF488Q96MN9 340 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 NIT2Q9NQR4 276 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 SLC7A11Q9UPY5 501 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ZFHX4Q86UP3 3567 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 CACNA1BQ00975 2339 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 SSSCA1O60232 199 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms